KEGG   Lactiplantibacillus plantarum ZJ316: zj316_2261
Entry
zj316_2261        CDS       T02458                                 
Symbol
rhe3
Name
(GenBank) ATP-dependent RNA helicase
  KO
K18692  ATP-dependent RNA helicase CshB [EC:5.6.2.7]
Organism
lpt  Lactiplantibacillus plantarum ZJ316
Brite
KEGG Orthology (KO) [BR:lpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpt03019]
    zj316_2261 (rhe3)
   03009 Ribosome biogenesis [BR:lpt03009]
    zj316_2261 (rhe3)
Enzymes [BR:lpt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     zj316_2261 (rhe3)
Messenger RNA biogenesis [BR:lpt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     zj316_2261 (rhe3)
Ribosome biogenesis [BR:lpt03009]
 Prokaryotic type
  rRNA helicases
   zj316_2261 (rhe3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 ApbA Microtub_bd
Other DBs
NCBI-ProteinID: AGE39800
Position
complement(2298180..2299523)
AA seq 447 aa
MTASFEDFKLQPFLMQALTDINFRKPTAVQEKLIPVIAAGRSVIGQSATGSGKTHTFLLP
MINQLNADERYVQAVITTPSRELAYQIQTAAKQLIQHSPKAIHIGLYVGGTDKQEQIEKL
NRHQPQLIIGTPGRILDLMRSQALDVHRATQLVVDEADMTLDLGFLNVVDQIAGRMPADL
QMLVFSATMPQKLTPFLRKYMNNPVMEEIPVESVISPTIDNWLISTKSHDKNSIIYRLLT
IGEPYLVLIFANTKERVQELTHYLRQQGLTVAMIHGDIQPRERKRVMRDVQQLKYQFVVA
TDLAARGIDIEGVSHVINDDIPNDLEFFIHRVGRTGRNGMAGTAITLYSPGEEAKVSAVE
AMGIKFKPKAIRDGEIVDSYDRNRRAKRGPKQEKLDPTLIGYVKKSKKKIKPGYKRRIRK
KISDKARMDRRIEQRAAARKERKERKS
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaccgcaagttttgaagattttaaattgcagccgttcttgatgcaggcactgactgac
atcaatttccgcaaaccgactgcggtacaggaaaagttgattccagtgattgctgctggc
cgcagcgtcatcggtcagtcagcaactgggagtggtaagacgcatacgtttttactgcca
atgatcaatcaactgaatgctgatgaacgttacgtgcaggcagttatcacaacgcccagc
cgtgaattagcttatcagattcagactgctgctaaacagttgatccaacacagcccgaaa
gccattcacattggactctatgtcggtgggactgataagcaggaacagattgaaaagcta
aatcggcaccaaccacagttgattattgggaccccaggacggattctggacttaatgcgc
tcccaggcactcgatgtgcatcgtgcgactcagctagtagttgatgaagccgatatgacg
ctagacttgggctttttgaacgtggttgaccagattgctggccgaatgcctgctgattta
caaatgttggtgttctcagccacgatgccacaaaaattaacgccatttttgcgcaagtac
atgaacaatccagttatggaagaaattccagtagaatctgtgattagtccgactattgat
aactggctgatttccaccaagagtcacgataaaaacagtattatttatcgcttgctgacg
attggtgaaccgtatctcgtgttgatttttgctaacacgaaggaacgagttcaagagttg
acccattatttgcgccaacaaggtttaacggtcgcaatgatccatggagatatccaacca
cgtgaacgaaagcgggttatgcgcgacgtccaacaattgaagtatcaatttgttgttgcc
actgatctagctgcccgtgggattgatattgaaggtgtttcacacgtcatcaatgatgat
attccgaatgacttagaattcttcattcaccgtgttggccggaccggccggaatggaatg
gcggggactgcgattacgttatatagcccaggcgaagaagccaaggtcagtgcagttgaa
gcaatggggatcaagttcaaaccgaaggcgattcgtgatggtgagattgtggattcatat
gaccgtaatcgtcgggctaaacgggggccaaaacaggaaaaactggacccaaccttgatt
ggttacgtcaaaaagtccaagaaaaagatcaagccgggttacaaacgccgcattcgtaaa
aagatcagcgataaggcgcggatggaccgccgcatcgaacaacgagcggctgcccgcaag
gaacgcaaggagcgtaagtcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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