KEGG   Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_0465
Entry
LAR_0465          CDS       T00735                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
lrf  Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf00470  D-Amino acid metabolism
lrf00550  Peptidoglycan biosynthesis
lrf01100  Metabolic pathways
lrf01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:lrf00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LAR_0465
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LAR_0465
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    LAR_0465
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lrf01011]
    LAR_0465
Enzymes [BR:lrf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     LAR_0465
Peptidoglycan biosynthesis and degradation proteins [BR:lrf01011]
 Precursor biosynthesis
  Amino acid ligase
   LAR_0465
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_4 ATP-grasp ATPgrasp_ST
Other DBs
NCBI-ProteinID: BAG24981
Position
538404..539552
AA seq 382 aa
MVFIMTQKLHIALLFGGNSSEHDVSKRSAHNIYDALDKEKYDVSLFMFTKDGILLGNEDS
QKIFDGEPEDQVVAEAYQKMDMSSPLAPIMALNEQKEIDFFFPVIHGNLGEDGTIQGLFK
LLNKPYVGSNIAASAMSFDKDLTKKIISQAGIRNTPYVVVTPENQADYSWGRIEEKLGNL
TFVKPAKQGSSVGIHRVTNAEEYEKALDDAFKYDYKILVEQGIANPQEIEISILGNEHPI
ASKLGAVRVPKDDPFYDYENKFVDASGVVFELPVKLPQYLVDEITDMALKAYKALGMKGM
ARIDFLVDSNNVPYLGEPNTLPGFTNISLYPQMWEVSGISYSDLIDRLIQLGLQEFERNS
KIKYDFRKLGTERVGQKKYNED
NT seq 1149 nt   +upstreamnt  +downstreamnt
gtggtatttattatgacccaaaaattacacatcgctttattatttggtggcaactcctct
gaacatgatgtgtcaaagcgatcagcacataatatctatgatgctcttgataaggaaaag
tatgatgtaagtctttttatgtttacaaaggatggaattctattaggcaatgaggattcc
caaaagatctttgatggcgaacctgaagaccaagtggtagcggaagcatatcaaaagatg
gatatgagtagtccattagcaccaattatggccttaaacgaacaaaaggaaattgatttc
ttcttccctgttatccatggtaatttaggtgaagatggtacaattcaaggtctctttaag
ctccttaataagccatacgttggttcaaatattgcagctagtgcgatgtcttttgacaag
gaccttactaagaagattattagtcaagctggtattcgcaacaccccttatgtagtagtt
acgccagaaaaccaggctgactattcatggggacggattgaagaaaaattaggcaatctc
acttttgtaaagccagctaagcaaggttcctccgttggaattcatcgagttactaacgct
gaagaatacgaaaaagcattagacgatgcctttaagtatgactacaagatcttagtagaa
caaggaatcgctaatcctcaagaaattgagatttcaatcttaggaaatgaacacccaatt
gcctctaagttaggagctgtacgtgtacctaaggatgatccattctatgattatgaaaac
aaatttgtggatgccagtggagttgtttttgaacttcctgttaaattaccacaatactta
gttgatgaaattacagacatggctttgaaggcatacaaggcattaggaatgaaggggatg
gctcggattgactttttagttgacagcaataatgtcccttatcttggtgaaccaaatact
ttaccaggatttactaacattagtttgtatcctcaaatgtgggaagtttctgggatttca
tattccgacttgattgatcggctaattcaattaggattacaagaatttgaacgaaacagt
aagattaagtacgatttccgtaagcttggtaccgaacgtgttggtcaaaagaaatataac
gaagactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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