KEGG   Ligilactobacillus ruminis: LRC_00600
Entry
LRC_00600         CDS       T01626                                 
Name
(GenBank) Sortase-anchored surface protein
Organism
lrm  Ligilactobacillus ruminis
SSDB
Motif
Pfam: Collagen_bind SpaA Big_8
Other DBs
NCBI-ProteinID: AEN77393
UniProt: G2SPN9
Position
67416..70838
AA seq 1140 aa
MERNKTFKKLLWLLGAMATVFAIVFAMGKFDGEKANAAVELNQNNTVSFIDSVKIMVSHK
DSTSEELKNNDVYILRDGDKISVDYNFSFSDNTDINPGDTYTIYVPRAFKAYNSCDGKLK
NEDGTGFGTWQMSGTFDNENNGYPLVMTFNDNIKKIQGRKGTIHLESSLDIESFSKENRQ
EIKIPLKDSTTYNVEIKQHTDEKFGDVTKNGWFLGNGWQPKRAHWTIDFNKGLNDIENPV
LKDNLYRADGQCSEHKIDYNSFDVYSVRLDSYGGVIENSKEKVNPQEYEIVKSADGMSYE
LHFKHKIKGAYRVEYETDITNYSGNREATKVGNKVSSYDGDKHLADASKELWANWWNKGG
TIVKNGVQKDSNRVDWTIYYNLVGHKFGDSTILLDSLYSGTFDKNSFEIYEASSIDGNPF
NNNKNNINIGRKLSSSEYSIVYSAKSDCKVATIKINNSDGKGYVIRYRSILPDWLWQGAQ
IRNHVKDGHDNEGESSIWYDQVKEHVYKEHRNVTENTIDWSVKFYKAASNNAFKAFKNLT
LTDHFYTNRGNQLNLVGGLNTVKVYRSSGPGDWNTNILVDPGEYTIKEDNKSGEGGYKGF
KITFKGEAPAALYEARYQTTRDSSQESGNWAQFGNEQTRDSVPADGGVSKNIGIGKSNSG
VHRTDGLLHWDVYVNAEKLPMSNYVVKDTITGDQTLMASTIKVKDLTDNKDVTSQVRREI
QETTTTYNQDGKTYTSPAKLLIIHLPDTDHQYCISYGVKLGPVGYTSNKNHYIDYADLYQ
GNDKKGSATSDYWHWQKTLEKDGVVDNDDNSLVNWTIDANKAYVTYPNGAIKDTLDGKQI
FVEDSIEVYRYEGLDQWHDKLSSKPLPKSAYNAKIVPYTTSDGRVTQQMIITFNDDQKNN
PGEKANYISRPYRIKYQTKILTSGKDRVANTASIEGLDNRVIYTKVDKDKEVTHTSGDAT
ITGYNVDFDILKRDAIDKKVMRDVHFDLYRLADDKWIPYIQDVSTGVNGRISYKGLLTGR
YKLVETRTQSGYIKLDTPIYFILSKKNMSDVKDKESSITITDADGNKIKNPAYASIIAMN
PEKKKTTTLQVLNYPVGGMLPQTGGPGRLLFEALGLLLIVVACALTEVLIWRRIRSSKGV
NT seq 3423 nt   +upstreamnt  +downstreamnt
atggaaagaaataaaacatttaaaaagctgctctggcttttgggggcgatggccacggta
tttgcgattgtttttgccatggggaagttcgacggcgaaaaggcaaatgctgcggttgag
ttgaatcaaaacaataccgtcagttttattgacagcgtaaaaattatggtcagtcataaa
gattcgacatcagaggaacttaagaataatgatgtatacatattaagggacggcgacaag
atatcggttgattataatttcagtttttctgataatacggacatcaatccgggcgacaca
tatacgatttatgttccaagggctttcaaggcatataattcctgtgatggcaagctcaag
aatgaagacggaacgggatttgggacatggcagatgtccggcacgtttgacaatgaaaac
aacgggtatccgttggtcatgacttttaacgataacattaaaaagattcagggacgcaaa
gggacaatacacctcgagtcgtctttggatattgaaagcttttccaaagaaaatcgtcag
gagatcaaaattccgttgaaagacagtacgacttacaatgttgaaatcaagcagcatacg
gatgaaaaattcggggacgtgacaaaaaacggctggtttctcgggaacggctggcagccg
aagcgagcacattggacgattgatttcaacaaagggctaaacgatattgagaatcctgtt
ttgaaagacaatttgtatcgtgctgacggtcaatgttctgaacataaaatcgactataac
agtttcgatgtttattccgttcgacttgattcttatggcggagtcatcgaaaacagcaag
gaaaaagttaatccgcaagaatatgaaatcgtcaagtctgccgatggcatgagttatgag
cttcattttaagcacaaaatcaagggcgcatatcgtgtagaatatgaaacggatattacg
aattattccggtaatcgtgaggcaacgaaggttggcaataaggtttcctcatatgatggc
gacaaacatctggccgatgcgtccaaggaactttgggcaaattggtggaacaagggtggc
acgattgttaaaaatggcgtccaaaaagacagcaacagagttgattggacgatctactac
aaccttgtcggtcacaagttcggcgacagcacgatcttgttggacagtttgtacagtgga
acgtttgataagaacagttttgaaatctatgaggcttcatcaattgacggaaatccgttc
aataacaataagaacaacatcaatattggtcgcaagctttcaagcagcgaatattccatt
gtgtattcagccaaatctgattgtaaagttgcaacgatcaagattaataattcagacggc
aaagggtatgtgattcgctacagatcgattttgccggattggttatggcaaggcgctcaa
atcaggaatcacgtcaaagacggacatgacaatgaaggcgaaagcagcatctggtacgat
caagtaaaagagcatgtttacaaggagcacaggaacgttaccgaaaatacgatcgactgg
tccgtaaaattctataaagcggcaagcaacaatgcttttaaggcgttcaagaatctgact
ttgacagatcacttttataccaatcgcggcaatcagcttaacctggtgggcggactgaat
accgtcaaggtctatcgaagcagcggacctggagactggaatacgaatattttggttgac
cctggcgaatatacgattaaagaagacaataaatcaggcgaaggcggatacaaaggcttc
aagattacgtttaaaggcgaagcaccggctgcgctttatgaagcaaggtatcagacgaca
cgcgattcttctcaagaatcagggaactgggcacagtttggcaatgagcaaacgagagac
agtgttcctgctgacggcggagtttctaaaaacatcgggattggaaagagcaattctggg
gtccacagaacagacggtctcttgcattgggatgtctacgtcaatgcagaaaagcttccg
atgagcaactatgtggtcaaggatacgattactggtgaccagactctgatggcatcaaca
atcaaggttaaagacctgactgacaacaaggatgttacgagtcaagtcagacgagagatt
caggaaacgacgacaacgtacaatcaggacggaaagacctatacgtcgcctgcaaagctt
ctgattatccatttgcctgatacggaccaccaatactgtatttcgtatggcgtaaaactt
ggaccggtcggatacaccagcaataagaatcactatattgattacgctgatttgtatcaa
ggaaatgacaagaaaggcagtgctacaagcgattattggcattggcagaaaacacttgaa
aaagatggcgtggtcgacaatgatgacaacagtctcgtgaactggacgatcgacgccaac
aaggcgtatgtcacctatcctaacggtgccatcaaggatactcttgatgggaagcagatt
ttcgttgaagactcgattgaagtatatcgatatgaaggattagatcagtggcatgacaag
ctttcgagcaaaccgcttccgaagtcggcatacaatgcgaaaattgttccgtatactact
tccgacggaagagtcactcaacagatgattatcacgttcaatgatgaccaaaagaataat
cctggcgaaaaggccaactatatcagtcggccttacagaatcaaatatcagacaaagatt
ttgacttcaggaaaggatcgcgtagccaataccgcatcaatcgaggggttggacaacagg
gttatttatacgaaggttgataaagataaggaagtgacgcatacttccggtgatgctacg
attactggatataatgtcgacttcgatattttgaaacgcgatgccatcgataagaaggtc
atgcgtgacgttcattttgatttgtatcgtttggcagacgacaagtggataccgtacatt
caagacgtatcgacaggcgttaacggacgaatcagctacaaaggcttgcttaccggtcgg
tacaagctcgttgaaacgagaacgcaatcaggctatataaaacttgacactccgatttat
ttcattttgagtaaaaagaacatgagcgacgtcaaggataaggaatcttcgattacgatt
acagatgctgacggcaacaagattaaaaatcctgcttacgcaagcatcattgccatgaat
cctgagaagaaaaaaacgacaacgcttcaggttttgaattatcctgtcggagggatgctt
cctcaaacaggcggaccgggcagattgttgtttgaagcattgggattgctgctgatcgtt
gttgcgtgtgccctgactgaggtgctcatctggcgacggattcgcagttcaaagggggtg
tga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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