KEGG   Ligilactobacillus ruminis: LRC_12460
Entry
LRC_12460         CDS       T01626                                 
Symbol
clpX
Name
(GenBank) ATP-dependent protease ATP-binding subunit
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lrm03110]
    LRC_12460 (clpX)
Chaperones and folding catalysts [BR:lrm03110]
 Heat shock proteins
  HSP100
   LRC_12460 (clpX)
SSDB
Motif
Pfam: AAA_2 zf-C4_ClpX AAA ClpB_D2-small AAA_5 AAA_22 MCM RuvB_N Mg_chelatase AAA_14 AAA_18 NACHT IstB_IS21 Sigma54_activ_2 PduV-EutP ResIII AAA_28 Sigma54_activat AAA_16 TsaE Kinase-PPPase AAA_7 PhoH AAA_24 AAA_15 nSTAND3 AAA_33 ABC_tran T2SSE RNA_helicase DEAD AAA_PrkA AAA_19 SMC_N AAA_29 Parvo_NS1 TniB
Other DBs
NCBI-ProteinID: AEN78503
UniProt: G2SPQ1
Position
complement(1296363..1297595)
AA seq 410 aa
MYDNTDQSESAICSFCGKSEHQVKSMISGPGVYICNECVELAQSIISEENKVSAQRELTD
VLTPKEIVKTLNQYVIGQNEAKKTLAVAVYNHYKRINAMLEDENEDTELQKSNICLIGPT
GSGKTYLAQSLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLLQNADYDVERAQRGII
YIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTIANVPPQGGRKHPQQEFIQIDTT
NILFIVGGAFDGIEKIVKNRLGDKTIGFGVEARKNYDESKSLMQQIIPEDLLKFGLIPEF
IGRLPIITALEKLTEDDLVRILTEPKNALVKQYAKLLSFDDCELVFEDDALREVARLAIK
RNTGARGLRSIIEATMRDVMFDVPSDKDIARVVITKETVDGTGKPEIVKK
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgtacgacaatacagatcaaagtgaatcagcaatctgctcgttttgcggtaaaagcgaa
caccaggtcaaaagcatgatttccggaccgggagtttacatctgcaacgaatgcgttgag
ttggcacagtcaatcatcagtgaagaaaacaaggtttctgcacagcgcgaattgactgat
gttttgacgccaaaggaaatcgtaaaaactttaaatcagtacgtcattggtcaaaacgag
gccaagaagacattggcggttgcggtttacaatcattacaagcgcatcaacgcaatgctt
gaagatgagaacgaagatacggaacttcaaaaaagcaatatctgcctgattggaccaacc
gggtccggcaagacgtatcttgcgcaaagtttggcgaaattgctgaacgttccttttgca
atcgctgatgctacgacgttgactgaagcaggttacgttggcgaagacgttgaaaatatt
ttgctgaagctcttgcaaaatgcggattacgatgtagagcgtgcacaaagaggaatcatc
tacatcgatgaaattgacaaaattgctaaaaagagcgaaaacgtttcaattacgcgtgac
gtttctggtgaaggcgttcaacaatctttgcttaaaattttggaaggaacgattgcgaac
gttcctccgcaaggaggcagaaagcatccgcagcaagaatttatacaaatagatacgacc
aacatcttgtttattgtcggtggtgcttttgatggtattgaaaaaatcgtcaagaaccgc
ttaggcgataaaacaatcggatttggcgttgaagcacgcaagaactacgatgaatcaaag
agcttgatgcaacagattatcccggaagatttgcttaaatttggtttgattcctgaattt
atcggacgtttgccaattataaccgctcttgaaaaattgacggaagatgatctggttcga
atattgactgaacccaaaaatgctttggttaagcaatatgctaaacttctgtcgttcgat
gactgtgaattggtttttgaagacgatgctttgcgcgaagttgcgcgtttggcaatcaaa
cgtaataccggcgcacgcggattgcgttcgatcattgaagcaacgatgcgcgatgttatg
tttgacgttccgagcgataaggatatcgccagggttgttattacgaaagagactgttgac
ggtacgggaaagcctgaaatcgtcaaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (37)   
   Pfam (37)   
All databases (44)   

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