KEGG   Limosilactobacillus reuteri SD2112: HMPREF0538_20164
Entry
HMPREF0538_20164  CDS       T01551                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lru  Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:lru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lru03019]
    HMPREF0538_20164 (rnc)
   03009 Ribosome biogenesis [BR:lru03009]
    HMPREF0538_20164 (rnc)
   03036 Chromosome and associated proteins [BR:lru03036]
    HMPREF0538_20164 (rnc)
Enzymes [BR:lru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HMPREF0538_20164 (rnc)
Messenger RNA biogenesis [BR:lru03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HMPREF0538_20164 (rnc)
Ribosome biogenesis [BR:lru03009]
 Eukaryotic type
  90S particles
   RNase
    HMPREF0538_20164 (rnc)
 Prokaryotic type
  rRNA processing factors
   HMPREF0538_20164 (rnc)
Chromosome and associated proteins [BR:lru03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HMPREF0538_20164 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: AEI56377
UniProt: F8DKS2
Position
complement(161413..162114)
AA seq 233 aa
MIKELQDYLAKEFNIHFDNPALLAEAFTQASYVNEHPNQGLKYYERIEFLGDAVLELIVS
EYIYKRFPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGHGEEMAGARERPGLLC
DIFESFIGALYLDQGRPAVEKFVQRVIFPKLDMGWFDHAVDAKTSLQEFLQRDGDIAIEY
HLVEESGTENDPEFKVNVTANGDVIGEGKGSSKKHAEMQAAQQALDNMRNKNK
NT seq 702 nt   +upstreamnt  +downstreamnt
atgatcaaagaattacaagactacctggccaaggaatttaatattcattttgataatcct
gctttattagcagaagcttttactcaagcttcgtatgtaaatgaacatcctaaccaagga
ttaaaatattacgaacggattgaatttcttggcgatgctgtgttggaactgatcgtttca
gaatatatttataaacgtttccctgaattgccacagggaaaacttactcgcttaagagcg
gcaatggtatgtgaagatagtttttctaaatttgccaaggaatgtcattttgatcaatat
attcgcttgggtcatggtgaggaaatggccggcgcaagagaacggccaggcttgctatgt
gatatttttgaatcatttattggtgccctctatttagatcaaggccgaccagcagtcgaa
aaatttgtccaacgggttatctttcctaaacttgatatgggctggtttgatcatgctgtt
gatgccaagactagtcttcaggaatttctccaacgtgacggtgacattgccattgaatat
catttggtggaggaaagcggaacagaaaatgaccctgaatttaaagtaaatgttactgct
aacggtgacgttatcggtgaaggaaagggctcatcaaagaagcatgctgaaatgcaagca
gcacaacaggcacttgataatatgagaaataaaaataaatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system