KEGG   Listeria seeligeri: lse_1212
Entry
lse_1212          CDS       T01184                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
lsg  Listeria seeligeri
Pathway
lsg02024  Quorum sensing
lsg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    lse_1212 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    lse_1212 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsg03019]
    lse_1212 (hfq)
   03036 Chromosome and associated proteins [BR:lsg03036]
    lse_1212 (hfq)
Messenger RNA biogenesis [BR:lsg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     lse_1212 (hfq)
Chromosome and associated proteins [BR:lsg03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    lse_1212 (hfq)
SSDB
Motif
Pfam: Hfq LSM DUF5608
Other DBs
NCBI-ProteinID: CBH27363
Position
1233509..1233742
AA seq 77 aa
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHA
ISTFSPQKNVALNPDAE
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaaacaaggtggacaaggattacaggattactacttaaatcaattacgtaaggaaaaa
attcttgcaacagtatttttaacaaacggttttcagttaagaggacgtgttgtaagtttt
gacaattttacggtgttacttgatgtcgaagggaaacaacaacttgtatttaaacacgca
atttcaactttctccccgcagaagaatgtagctttaaatcctgatgcggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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