KEGG   Ligilactobacillus salivarius UCC118: LSL_0415
Entry
LSL_0415          CDS       T00337                                 
Symbol
rnhA
Name
(GenBank) Ribonuclease HI
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
lsl  Ligilactobacillus salivarius UCC118
Pathway
lsl03030  DNA replication
Brite
KEGG Orthology (KO) [BR:lsl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LSL_0415 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsl03032]
    LSL_0415 (rnhA)
Enzymes [BR:lsl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     LSL_0415 (rnhA)
DNA replication proteins [BR:lsl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    LSL_0415 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     LSL_0415 (rnhA)
   Elongation factors (archaeal)
     LSL_0415 (rnhA)
SSDB
Motif
Pfam: RNase_H Cauli_VI PIN-TPR-GreABC
Other DBs
NCBI-ProteinID: ABD99225
UniProt: Q1WUW0
Position
459722..460381
AA seq 219 aa
MGKFYAVKKGRKTGIFTTWAECQKQVSGFPKAEFKSFISKQEADDWLKEIKSSNENRRKS
YSVIVYTDGGSRNHGNKKGEHVKKNDKAAWAYLIKYQGSIISDTDGEYGSTNNRMEIMAL
KKALLDLKQRELQNEKILVVLDSKYVLDAITKRWLQSWEKNGWKTSAGTGVKNKELWMEI
SRLLPEFPNLDYQWTKGHANDEGNNLVDELLNKTMDQMD
NT seq 660 nt   +upstreamnt  +downstreamnt
gtgggtaaattttatgctgtaaaaaagggaaggaaaactggaattttcactacttgggca
gagtgtcaaaaacaagtatctggctttccaaaagcggagttcaaaagtttcattagcaag
caagaagcagatgattggttgaaagaaattaaaagtagtaatgaaaatagaagaaagagt
tatagtgttattgtctatacggatggtggttctagaaatcatggaaataaaaaaggagag
catgtaaagaaaaacgataaagctgcatgggcatatctaataaaatatcaaggttcaata
attagtgatactgatggagaatatggaagtactaataataggatggaaatcatggcttta
aagaaggcattattggatttgaaacaacgagagttacaaaatgaaaaaattttggtagtt
cttgattcaaaatatgttttagatgctattactaagcgatggttacaatcgtgggagaaa
aatggttggaaaacttctgcgggaactggtgttaagaataaggaattatggatggaaatt
agcagattattgccagaatttccaaatttagattatcaatggacaaagggacatgccaat
gatgaaggaaataatttagttgatgagttgttaaataaaactatggatcaaatggattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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