KEGG   Fructilactobacillus sanfranciscensis: LSA_05180
Entry
LSA_05180         CDS       T01627                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
lsn  Fructilactobacillus sanfranciscensis
Pathway
lsn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LSA_05180 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsn03400]
    LSA_05180 (uvrB)
DNA repair and recombination proteins [BR:lsn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LSA_05180 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LSA_05180 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 DMTF1_N AAA_22 P-loop_SecA Microtub_bd
Other DBs
NCBI-ProteinID: AEN98959
UniProt: G2KVE4
Position
505849..507852
AA seq 667 aa
MVTKSHKKFDLVSKYKPTGDQPSAIKKLDQGLAAGDKEQTLLGATGTGKTFTMANVIRDQ
NRPTLVLAHNKTLAGQLYTELKKFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASIN
DEIDQLRHAATSALLSRNDVIVVASVSSIFGLGSPKEYQDHTVTLHVGEEMERDILLRKL
VNIQFQRNDIDFDRGRFRVHGDTVEVFPASGTQNAYRIEFFGDEIDKITQVNTLTGEVLG
NPEQVTLFPATHFLTNDEVMNVALPEIKTDMEKQVAAMEKSGKLLEAQRLKQRTTYDIEM
MREMGYTTGIENYSRYMDRRKPGEPPYTLLDFFPKDFLMFVDESHQTLPQVHGMIKGDKA
RKKQLIDYGFRLPSSYDNRPLDFTEFEKHIHQVIYMSATPGTYELENSSQVVEQIIRPTG
LLDPTVEVRPTKDQMDDLVGKINERIKKNQRTFVTTLTKKMSEDLTDYLKDLGIKVRYLH
SDIKTLERTRIIRDLRLGKFDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNPRSLIQ
TIGRAARNENGHVIMYADRVTDSMQAAMDETTRRRKIQIAYNKEHHITPKTIIKPISKAI
SAYKQDEDDKYNKKKPFAETDFEQMSYKEQEQMIKNLSDEMREAAKQLDFEQAASLRDTI
KKLKKDM
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggttacaaaatcacacaaaaaatttgatttagtatcaaaatataaaccaacaggggac
caaccgtcagccattaagaaattggatcaaggattagctgcgggtgataaagaacaaact
ttactaggagcaactggaactgggaagacttttacaatggcaaatgtcattagagatcag
aatcgtcctactttagttttggctcataataaaactctagctgggcaattatatacagag
ttaaaaaagtttttcccaaataatgctgttgaatattttgttagttattatgattattac
caacccgaagcatatgtaccttcaagtgatacttacattgaaaaagatgcttcgattaat
gacgaaattgatcaactccgacatgcggcaactagtgcattgttatcacgtaatgatgta
attgtcgtggcctcagtttcttcaatttttggattaggtagtcctaaagaataccaagac
catacagttacacttcacgttggagaagaaatggaacgtgatattttattacgtaaatta
gttaacattcaattccaacgcaatgatattgactttgatcgtggtcgttttcgtgtgcac
ggagatactgtcgaagtctttccggcatctggcacgcaaaatgcttatcgaatcgaattc
tttggagatgaaattgataagattacacaggttaatactctaactggtgaagtactcgga
aatccagaacaagttactttattccctgcgactcatttcttgaccaatgatgaagtgatg
aacgtggctttacctgaaattaaaaccgatatggaaaaacaagtggctgccatggaaaaa
tcagggaaattgttggaagcacaacgactcaaacaacgaacgacatatgatattgaaatg
atgcgtgagatgggatataccactggaattgaaaattattcacgctatatggatcgtcgt
aaaccaggggaaccaccttatacattgcttgatttctttccaaaagatttcttgatgttt
gtcgatgaatctcaccagacgcttcctcaagttcacggaatgattaaaggggataaagcg
cgaaaaaaacaattaattgattatggatttagattacctagttcttacgataatcgtccg
ttagattttactgaatttgaaaaacatattcaccaagttatttatatgtcagccacacca
gggacttacgagttagaaaatagtagccaagtggttgaacaaataatccgaccaaccgga
ttattagatcccacggttgaagtccgtcctacaaaggatcaaatggatgatttagttgga
aaaattaacgaacgaattaagaaaaaccaacggacatttgttacgactttgacgaagaaa
atgtcggaagatttgactgattatttgaaagatttagggattaaagttcgttatcttcac
agtgacattaaaaccttggaacggactcgaattattcgagatcttcgtttaggtaaattt
gatgtgcttgttggaattaacttgcttcgggaaggaattgatgttccggaagtttcatta
gttgcgattttagatgctgataaggaaggatttttacgtaatccacgttcacttatccaa
acgattggtcgggctgcccgaaatgaaaacggacacgttatcatgtacgctgatcgagta
acagactcgatgcaagctgccatggatgaaacaactcgacgtcgtaaaattcaaattgca
tataataaagaacatcatattacgcccaaaactattatcaaaccaatttctaaggccatt
tcggcttacaagcaagatgaagatgataagtacaataagaaaaaaccatttgcagaaact
gattttgaacaaatgagttataaagaacaggaacaaatgattaaaaacttaagtgatgaa
atgcgtgaagctgctaaacaattagactttgaacaagctgcatcacttcgagacacaatt
aaaaaattaaaaaaagatatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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