KEGG   Candidatus Liberibacter solanacearum: CKC_05675
Entry
CKC_05675         CDS       T01373                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
lso  Candidatus Liberibacter solanacearum
Pathway
lso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CKC_05675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lso03400]
    CKC_05675
Enzymes [BR:lso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CKC_05675
DNA repair and recombination proteins [BR:lso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CKC_05675
    RecFOR pathway proteins
     CKC_05675
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_22 AAA_14 AAA_17 Rad17 nSTAND3 ResIII AAA_3 AAA_18 NTPase_1 TsaE AAA_16 AAA_33 RNA_helicase NB-ARC NACHT AAA_24 AAA_28 MCM AAA_7 IstB_IS21 AAA_25 Parvo_NS1 Cytidylate_kin
Other DBs
NCBI-ProteinID: ADR52880
UniProt: E4UE52
Position
complement(1210004..1211038)
AA seq 344 aa
MTDREGLLSHSVSKEDGDVLLLRPRTLDEFTGQTEACSNLKVFIEAAKARSEALDHVLFV
GPPGLGKTTLAQVVARELGVNFRSTSGPVIAKAGDLAALLTNLEDRDVLFIDEIHRLSII
VEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLSNPLQDRFGIPIRL
NFYEVEDLKTIVHRGAKLIGLPITDEAAYEIAMRSRGTPRIAGRLLRRVRDFAEVAHAEI
ITRDIADEALVRLSVDKMGFDQLDVRYLTMIARHFGGGPVGIETISAGLSEPRDAIEDLI
EPYMIQKGFIQRTPRGRLLMPSAWKHLGISIPYKVQNTFCGKKE
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgacggatcgtgagggactattatctcatagtgtatctaaggaagatggtgatgttctt
ttattgcgtccgagaactttagatgaattcacgggtcaaactgaagcatgttctaatctc
aaggtttttatagaagcagctaaagcgcgttctgaagctttagaccatgtattgtttgtg
ggtcctccaggtcttggaaaaactactttagcacaggtcgttgctagggaattaggggta
aatttccgttcaacttcaggtcctgtgattgcgaaggcgggcgatcttgcggcgttgctt
actaatttagaagatcgtgatgtcttgtttattgatgaaatacacagactaagtattatc
gtggaagagattctttatcctgctatggaagattttcaacttgatcttatggttggagaa
ggtccatctgctcgttctgtgaaaattaatttatcgcgttttacgcttattgctgcgaca
acgagagttggacttctcagcaatcctttacaagatcgttttggtattcctattagatta
aatttttatgaggtagaggatttaaaaaccatagtgcatagaggggcaaagttaatagga
ttgcccataacagatgaagctgcatacgaaattgctatgcgatccaggggaactccgcgt
atcgctggaagattattgcgtcgtgtacgagattttgcagaggtagcgcatgctgagatt
attacaagagatatagcagatgaggctttggtgcgtctttcagtggataagatgggtttt
gatcaacttgatgtgcgttatttgacaatgattgctcgtcattttggaggtggaccagtc
ggcatagagactatttctgcaggtctttctgagcctagagacgctatagaagatttgata
gagccttatatgatacaaaagggttttattcagcgtacgccacgtggaaggcttttaatg
cccagtgcttggaaacatcttggtatttctattccttataaagtgcaaaataccttttgt
ggcaagaaagagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (40)   

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