KEGG   Lysinibacillus sphaericus: Bsph_1652
Entry
Bsph_1652         CDS       T00656                                 
Symbol
ymcB
Name
(GenBank) UPF0004 protein
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
lsp  Lysinibacillus sphaericus
Brite
KEGG Orthology (KO) [BR:lsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsp03016]
    Bsph_1652 (ymcB)
Enzymes [BR:lsp01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     Bsph_1652 (ymcB)
Transfer RNA biogenesis [BR:lsp03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    Bsph_1652 (ymcB)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2 DUF3079 Dor1
Other DBs
NCBI-ProteinID: ACA39250
UniProt: B1HR59
Position
1743600..1745144
AA seq 514 aa
MNEEQRLANQQVNQPKKEDKPEKDYSKYFEKVFTAPSLKDAKKRGKEDVKYHKDFSIDEQ
FAGMGKDRTFYIRTYGCQMNEHDTEVMAGIFMQLGYTPTEIIEEADVVLLNTCAIRENAE
NKVFGELGFLLKYKRKNPEMLIGVCGCMSQEESVVNKILRSYPHVDMVFGTHNIHRLPNI
LKEAYMSKEMVVEVWSKEGDVIENLPKKRLGSIKAWVNIMYGCDKFCTYCIVPYTRGKER
SRRPEEIIAEVRELAAAGYQEIMLLGQNVNAYGKDFEDIEYRLGDLMDALRKIDIPRIRF
TTSHPRDFDDHLIEVLAKRGNLVEHIHLPVQSGSNDILKIMARKYTREHFLTLVEKIKAA
IPEVTLTTDIIVGYPNETEEQFEETLSLYREVGFEAAFTYIYSPREGTPAAKMVDNVPEE
VKKERLQRLNEVVGEYSRKALERLNGEVVEVLVEGTSKRRDDVLAGYTRKNRLVNFKGPA
EVIGQLVKVKIIETTSYSLTGEFLEVVKNEKVEA
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgaatgaggaacaacgcttagctaatcaacaggtcaatcaaccaaaaaaagaagacaag
cctgaaaaggattacagtaaatattttgagaaggtctttacggcaccttccttaaaagat
gctaaaaaacgtggcaaagaagatgtgaaataccataaggattttagcattgacgaacaa
tttgcaggaatgggtaaagatcgtactttttacattcgtacttatggctgccaaatgaat
gagcatgacacagaagtaatggctggtatttttatgcagctgggttacacaccaactgaa
ataattgaagaggctgacgtggtcttgctgaatacatgtgccattcgagaaaatgctgaa
aacaaagtatttggagaacttggtttcctgttgaaatataaacgaaaaaacccagagatg
ctaatcggggtttgtggctgtatgtcgcaagaggaatctgttgttaataaaattttaaga
agctatccacatgtcgatatggtttttggaacgcacaatattcaccgcctaccaaacatt
cttaaggaagcttacatgtcgaaagagatggtcgtagaagtttggtcaaaagaaggcgat
gtgattgaaaatctgccgaaaaaacgccttggttccattaaagcatgggttaatattatg
tatggttgcgataaattctgtacgtattgtatcgtaccgtatacacgtggaaaagagcgg
agtcgtcgtccagaggagatcattgctgaggttcgagagctagcggcagcgggctatcaa
gagatcatgttgcttggtcaaaatgtcaacgcttacgggaaagactttgaggatatcgaa
tatcgtcttggtgatttaatggatgctttaagaaaaattgatattccaagaattcgtttt
acaacgagtcaccctcgagattttgatgatcatttaatcgaagtacttgcaaaacgtggt
aatttagtagagcatattcatttaccagtacaatctggctctaatgacattttaaaaatt
atggctcgtaaatatacacgtgagcatttcctgacattagtagaaaaaattaaggctgcc
attcctgaagtaacattaacgacagatattattgttggctacccaaatgaaacagaggaa
caattcgaggaaacgctttccttataccgtgaagttggctttgaggcagcatttacgtat
atatattctcctcgtgaagggacaccggctgcaaaaatggtcgataatgtacctgaagag
gtgaaaaaggaacgacttcaacgtttaaatgaagttgtgggtgagtattctcgtaaagcc
ttagagcgtttaaatggtgaggttgtcgaagtgttagttgaaggaacaagtaaacgacga
gatgatgtgcttgcaggctatacacgtaaaaatcgtttggtcaattttaaaggaccagca
gaagtaattggtcaattagtaaaggttaaaattatcgagactacatcttattcacttact
ggtgagtttttggaagtcgtaaaaaatgaaaaggtggaagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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