KEGG   Lonchura striata domestica (Bengalese finch): 110468930
Entry
110468930         CDS       T05897                                 
Symbol
CAPN9
Name
(RefSeq) calpain-9 isoform X1
  KO
K08578  calpain-9 [EC:3.4.22.-]
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsr01002]
    110468930 (CAPN9)
Peptidases and inhibitors [BR:lsr01002]
 Cysteine peptidases
  Family C2: calpain family
   110468930 (CAPN9)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 Ndufs5
Other DBs
NCBI-GeneID: 110468930
NCBI-ProteinID: XP_021382875
Position
3:complement(41595078..41617008)
AA seq 690 aa
MPYLYQDSKPRPAAHPGDARGTHSSEKDYEQLKQECLRRGVLFEDSDFPACNSSLFFSEN
PPIPFVWKRPGDIVKDPKFILGGATRTDICQGDLGDCWLLAAIASLTLNEKTLARVVPLD
QNFGPDYAGIFHFRFWQHNEWLDVVIDDRLPTFKGRLVFLHSAELNEFWSALLEKAYAKL
NGSYESLKGGSTIEAMEDFTGGIGEMYDVKTAPDNFYEILEKALKRCSMVGCSIDTSSAA
ESEARTPFGLVKGHAYSVTGIEEVSYRGRQVQLIRIRNPWGEVEWNGPWSDNSAEWRSVS
PSEQRRLSQAARDDGEFWMKFEDFKVHFDKVEICNLTPDALEDSTAHKWEVTIHQGSWVR
GATAGGCRNFLETFWTNPQIKLHLTEKDDGQDDCTFIAALMQKGRRKLKKLGAEMLTIGY
SIYESPGRDGHFGKDFFRYHPSKARSKTYINLREVSHRFKLPPGDYILIPTTFEPHQEAD
FCLRIFSEKKAITEDLDESVAIDLPEPLHPTPSPQETEEEKQFRALFEQISGKDMEISAE
ELEYVLNAVLKKTKNIKFKNLSLISCRNIISLMDTSGNGKLEFSEFKVFWEKLKKWISIF
LQFDFDKSGCMSSYELRGALKAAGYQLNNYLLQLIVLRYSDEQFQIEFDDFLNCLIRLEN
ASRVFQALSVKNKEFINLNIGEFINLAMNI
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgccctacctgtaccaagactcgaagccgcggccggctgcgcatcccggggatgcccgc
ggcacgcacagctcggagaaggactacgagcagctgaagcaggagtgcctgcgcaggggc
gtcctctttgaggactccgacttccccgcctgcaattcgtctctcttcttcagtgaaaac
ccacccattcccttcgtctggaagaggcctggggacattgtcaaagaccctaagtttatc
cttggaggagccaccagaactgacatttgtcaaggggatcttggtgactgctggctatta
gcagccattgcttctctcacactgaatgaaaaaacactagcaagagtggtgccactggat
caaaattttgggccagattatgctggaatatttcacttccggttttggcagcacaacgag
tggctggatgttgtgattgatgaccgattacccaccttcaagggccgcctggttttcctg
cactcagctgaactcaatgaattttggagtgccttactagagaaagcctatgccaagtta
aatggcagctacgagtctctgaagggtggcagtacaatagaggccatggaggatttcact
gggggtataggagaaatgtatgatgttaagacggctcctgacaatttctatgaaatccta
gaaaaagccctgaaaagatgctcaatggtgggctgttctattgataccagcagtgctgcc
gagtcagaagcccgaaccccatttggccttgtaaaaggccatgcgtactctgtgactggc
attgaggaggtgagctataggggccggcaagtgcagctcataaggataaggaacccatgg
ggagaggtggagtggaacggcccttggagtgacaactctgcagagtggcgctcagtcagc
ccatcggaacagagacgcctgtctcaggcagcacgggatgatggagagttctggatgaag
tttgaagacttcaaagtgcattttgacaaagttgagatctgcaacctgactccagatgcc
ctggaagacagcactgcccacaaatgggaagtgaccatccaccaaggcagctgggtccgg
ggggccaccgcaggaggatgtagaaattttctagagactttctggacaaatccacaaatc
aagctgcatttgacagagaaggacgatggacaagatgactgcacattcatagcagcactg
atgcaaaagggtcgccgtaaactcaagaagctcggagctgaaatgctgaccattggctac
tctatttatgagagcccgggcagagatggacacttcggcaaagacttcttcaggtaccac
ccctccaaggccaggagcaaaacctacataaatttaagggaagtatcgcaccgattcaag
ctgccaccgggcgattacattcttattccgaccacatttgagccgcaccaggaggcagat
ttctgcctgaggatcttctctgagaagaaggccatcactgaggatctagatgaaagtgtt
gccattgatcttcctgagcctctacatccaaccccaagcccacaagaaactgaagaagaa
aagcaattccgggcattgtttgagcagatttcaggaaaggacatggagatatctgcagaa
gagcttgaatatgttctgaatgctgtattaaaaaaaacaaagaacataaaattcaagaac
ttaagtctcatttcatgccgaaatatcatttctcttatggataccagtggcaatgggaaa
ttggaattcagtgagttcaaagttttctgggaaaaactgaagaaatggataagtatcttt
cttcaatttgactttgataaatctggctgcatgtcctcttatgagcttcgtggtgctctc
aaagctgcaggataccagctcaacaattacctgctgcaactgattgtcctccgatactct
gatgagcagttccagattgaatttgatgattttctgaactgcctaatacgcctggagaat
gcgagtcgagtattccaagcactgagtgtgaaaaacaaggagttcattaacctgaatata
ggcgagtttatcaacctggcaatgaacatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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