KEGG   Lactuca sativa (garden lettuce): 111902842
Entry
111902842         CDS       T05352                                 
Name
(RefSeq) exopolygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00040  Pentose and glucuronate interconversions
lsv01100  Metabolic pathways
Module
lsv_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111902842
Enzymes [BR:lsv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     111902842
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 End_N_terminal PPARgamma_N
Other DBs
NCBI-GeneID: 111902842
NCBI-ProteinID: XP_023754425
Position
7:complement(174875068..174882207)
AA seq 402 aa
MNTENSIRQAICCLFLIAYIARSHAAVVNIKTKGAKGDGITDDGQAIVSAWNEACGKEAP
SSVLIPRGTYMVFPPIDLIGPCKAPIKIKATGAVVKAPPELEKFTTTYWIAIRNVSKLTM
IGGTYDGQGEQTWKQNLCPDGGPGPCPLPVNLQFTNVTNSLLQHITSTDSKFFHMRLSLC
DNTRLDHITILSPANSVNTDGIQIGRLSGVNITNSVMRTNDDCISIGQGCRNIRIKNIMC
GPGDGIGIGSLGRRANEEPVQGIWIKNVTMTDTEHGFRIKTWPTSFPGSVSDLHYEDIIM
NNVSFPIFFDQQFCPLNNCQNGTASNVNISNVSFRNIRGTSATKVALKFDCSADVPCKNI
KVADINLTYEGPEGGPATSECANIKPKVVGKVVPPACPGGPD
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgaatacagaaaactcgatccgacaagcaatatgttgcttgtttcttatagcatacatt
gcaagaagccatgctgctgttgtcaacataaaaaccaaaggtgctaagggcgatggcata
accgacgatggccaggcgatagtaagtgcttggaacgaagcctgtggaaaagaagcacca
agctcggtgttgattccacgagggacctatatggtatttcctccgattgatctcattggc
ccatgcaaggctccaattaagatcaaagccaccggagccgtcgtcaaggccccacctgag
cttgaaaagttcacaaccacgtactggatcgccataaggaatgtcagtaagttgactatg
atcggtggtacttacgacggtcaaggcgaacaaacatggaagcaaaatttatgcccggac
ggcgggcccggaccttgcccacttccagtcaatcttcaattcactaatgtcacaaattca
ttgttgcaacacataacatctaccgatagcaaattctttcacatgaggttatctttatgt
gacaatacaagacttgatcatatcactattttatcaccggcaaacagtgtcaacacagat
ggaattcaaatcgggcgtttaagtggtgtcaacatcacaaactcagtaatgagaacgaat
gacgattgcatttctataggtcaaggatgcaggaacatccgtattaagaatattatgtgt
ggacctggagatggcataggtattgggagtttgggaagacgcgcaaatgaagaacctgta
caaggaatctggatcaagaatgtcaccatgacagatacagaacacggattcaggataaag
acttggcctacttctttccctggaagcgttagtgacttgcattatgaagatatcatcatg
aacaatgtgtcatttcccatattcttcgatcaacaattttgccctttgaataactgccag
aatggaactgcatcaaacgtgaacatatcgaatgtgagctttaggaatatcaggggaacg
tcagcaactaaggtggcattgaagtttgattgcagcgcagatgtaccatgcaagaacata
aaggtggctgatattaatttgacatacgaaggacctgaaggaggacctgccacctcggag
tgtgctaacattaaacccaaagtcgtcggtaaagttgtccctccagcttgtccaggtggg
ccagattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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