KEGG   Lactuca sativa (garden lettuce): 111905260
Entry
111905260         CDS       T05352                                 
Name
(RefSeq) WD repeat-containing protein PCN
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111905260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsv03009]
    111905260
Ribosome biogenesis [BR:lsv03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    111905260
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PDT
Other DBs
NCBI-GeneID: 111905260
NCBI-ProteinID: XP_052624030
Position
1:326854..330744
AA seq 786 aa
MLEFYKCRSSSVEWKPSPIVALATSVDESQVAAAREDGSLEIWLVSPGAVGWHCQLTIHG
DPNLRVSSLVWCSSGSCGLAAGRLLSSSIDGSISEWDLDNLTQKVVVDPIGVSIWQMATH
PMCNNTKQDLGYLENGHAAIGDGDGDVTSDSEVEGDSVELYEEPITGNACIAIACDDGCV
RLYDISDSDEVTYHKSLPRVSGRVLSVTWSPDARRIYSGSSDGFIRCWDAKSSHEVYRIT
VGLGGLGGGSELCIWSLLALRCGTLVSGDSSGSVQFWESSHGTLLQAHSCHKGDVNALAA
SPSHSRVFSAGSDGQVILYKASGDKSCEAIKKKCKWVYVGYVRAHTHDVRALVVAVPISR
EDLLVSGEEKVKRGHGTGVDLSMSYNKWAHMGIPMLISAGDDTKLFAYSANEFTKFGPHD
ICPAPQRPAIQLVCSSNMLLVQASKWLDIFTVDVKRGDAVSTTDMVARVKSKSKRKIICS
SMSSSGRFFAYSDHVRPCLFELMRKEEGGWSISKRKLPPCIPFAHSMIFTCDSSRLMISG
HDRMIYVVDVGSQKLSHRFTPCCKESDSELPPTQPPITKMFTSLDGQWLAAVNCFGDVYI
FNLETQRQHWFIARLDGASVTAAGFSPGNSNVLIISTSSNQAYVFDVEAKKLGEWSRHNT
FMLPRRYQDFPGEVIGLTFPPSSNSSTVIIYSARAMCLIDFGMPVGCDEDPDEKAITLKK
KLLKRKLHELEGKKGGRKNFEFCAFREPVLYVGHLSKGSVLVVDKPWLEVVNNFDAQPVH
RHIYGT
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgctcgagttctacaaatgtcgtagtagctcagtcgaatggaaaccttccccgatagtc
gctctagccaccagcgtggacgaatctcaggtcgctgccgctagggaagatggctccctt
gagatatggctggtatcccctggcgccgttggttggcactgccaactgacgatacacggt
gacccaaatctgagagtgtcttcgctcgtatggtgtagttcgggttcctgtggcttagcg
gctggcaggttgttgtcatcaagcattgatggatcaatatctgagtgggacttggacaac
ttgacacagaaggttgtggtggatcctattggtgtttccatttggcagatggctactcat
cctatgtgtaataatacaaaacaggatttgggttatctagagaatggacacgcagctatt
ggtgatggtgatggtgatgtgacgagcgacagtgaagtggaaggtgattcggttgagtta
tatgaagagccgattaccgggaatgcatgtatagcaattgcctgtgacgacggatgtgtg
cgtttatatgatatatcagactcagatgaggtcacttaccataaatcgctgccaagggtc
agtgggcgtgtattaagcgtcacttggagtccagatgcaagaaggatatattcagggagt
agtgatgggttcataagatgctgggatgctaaatcgtctcatgaagtatacagaatcact
gttggtcttggggggttaggcggtgggtctgaactttgcatatggtctttgcttgctctg
aggtgtgggacccttgtgagtggggacagcagtggcagcgttcagttttgggagagttca
catggtactctgttgcaagcacattcttgtcataagggggatgtgaatgctttggctgct
agtcctagtcatagcagggtgttctcagctggatcagacggtcaggttatcttatataag
gcctctggtgacaagtcttgtgaagcaataaaaaagaagtgcaagtgggtgtatgttggt
tatgtgagagcccatacacatgatgtgagagccttggttgttgctgtacccataagccgc
gaagatttattggtgtcgggtgaagaaaaggtaaaaagagggcatggcactggtgttgac
ttgagcatgagctacaataagtgggctcatatgggcattcccatgcttatatcagctgga
gatgacacaaagctttttgcatattcagccaacgagttcaccaaattcggtccacatgat
atctgtcctgcaccacaaagaccagccattcagttggtgtgcagtagtaatatgcttctg
gtccaggcttcaaagtggttggatatctttacggttgatgtgaaaagaggagacgctgtt
tcaactactgatatggtggctcgagtaaagagcaagagcaagaggaagatcatttgcagc
tccatgtcctcttcagggagattttttgcgtattcagatcatgtgagaccttgcctattt
gagctgatgagaaaggaggagggagggtggtccataagtaaaaggaaactcccaccatgc
ataccttttgcccattccatgatatttacttgtgattcttctcggttaatgatatcagga
catgacagaatgatatatgttgtagatgttggaagccagaaattaagtcatcgattcacc
ccatgttgtaaggagtcagattcagaattaccacctactcagcctccaattacaaaaatg
tttactagtttggatggacagtggctagctgcagtcaactgttttggagatgtgtatata
ttcaatctagagacacagaggcaacactggttcattgcaagattggatggtgcctctgtt
acagctgcagggtttagtcctggaaatagcaatgtgctaataatctctacatcttcaaac
caagcctatgtttttgatgtggaggctaagaaactaggggaatggtctagacacaacaca
tttatgttgcctcgaagatatcaggactttcctggagaggttattgggctcacatttccg
ccatcttcaaattcatcaactgtcatcatttacagtgccagggcaatgtgcttgattgac
tttgggatgccggtcgggtgtgatgaagatcctgatgagaaagcaataacattaaagaag
aagttattaaaacgtaagctgcatgagttagaaggtaaaaagggtggtaggaagaatttt
gaattttgtgcctttagagaaccggttttatatgttggccatctttcaaaaggttctgta
ttggtcgtagacaaaccatggttggaagttgttaacaattttgatgcccagccagttcac
agacatatatacgggacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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