KEGG   Lachancea thermotolerans: KLTH0E04598g
Entry
KLTH0E04598g      CDS       T01117                                 
Name
(RefSeq) KLTH0E04598p
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
lth  Lachancea thermotolerans
Pathway
lth03020  RNA polymerase
lth03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KLTH0E04598g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLTH0E04598g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lth03021]
    KLTH0E04598g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0E04598g
Transcription machinery [BR:lth03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     KLTH0E04598g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KLTH0E04598g
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 8291832
NCBI-ProteinID: XP_002553683
UniProt: C5DHI5
Position
E:415348..416334
AA seq 328 aa
MAEEGPQVKIREATKDNVDFILSNVDITMANSLRRVMIAEIPTLAIDSVEVETNTSVLAD
EFISHRLGLIPLQSSDINDLIYCRDCYCEDHCDRCSVVLTLQAVGESESTTNVYAKDLVI
VSNLMGRNIGHPIIQDKDGNGVLICKLRKGQELKLKCVAKKGISKEHAKWSPAAAIEFEY
DPWNKLKHTDYWHETDAAAEWPQSKNCEYEDPPNEDEAFDYNAKPTTFYMNVETVGSLTV
DQVVIRGMKTLQDKVADILFSLKKMDQDKVNFGGTAGMVDQDGGAMPVEPDSGFAYGSGG
PSSGSGMGGGPGAPFGHTGPSSGFDDAW
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcagaagaaggacctcaggtgaagattagagaagctaccaaagacaatgtggacttc
attctctccaacgtggatataacgatggccaactcgttgcgtagagtcatgatagcagag
atcccaacacttgcgatcgactcagtggaggtggaaaccaacacctctgtgctggcagac
gaatttatttcgcaccgcctgggcctaatcccgctgcagagcagcgatatcaatgatctc
atctactgcagagactgctattgcgaagaccactgcgaccgatgctccgttgtgctgaca
ctgcaggccgtgggcgagagcgagtcgactaccaacgtctatgccaaggatttagtgatc
gtaagcaacctgatgggccgcaacatcggccaccctattatccaggacaaagacggtaac
ggcgtactcatctgcaagctgcgtaagggccaggagctcaagctcaaatgtgttgccaaa
aagggtatctccaaggagcacgctaagtggtcacctgcggcggctatagaattcgaatac
gacccttggaacaagctaaaacacaccgactactggcacgagactgatgccgcggcagag
tggccgcagtccaagaactgcgagtacgaggacccaccaaacgaggacgaagcctttgac
tacaacgctaagccaactacattctacatgaacgtcgagactgttgggtctctgaccgtt
gaccaggtcgtcatccgcggcatgaagactctgcaggacaaagtggcagacattttgttc
tcactgaaaaaaatggaccaagacaaggtcaacttcggaggcactgcgggcatggtggat
caggacggaggagctatgcccgtggagcccgattccggcttcgcatacggcagtggcggg
cccagcagtggtagcggaatgggcggcggcccgggcgctcctttcggccacacgggtcca
agctccgggtttgatgatgcatggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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