KEGG   Lipotes vexillifer (Yangtze River dolphin): 103080251
Entry
103080251         CDS       T03090                                 
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
  KO
K12649  ATP-dependent RNA helicase DHX58 [EC:5.6.2.6]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:lve00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    103080251 (DHX58)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:lve04054]
    103080251 (DHX58)
Enzymes [BR:lve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103080251 (DHX58)
Pattern recognition receptors [BR:lve04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   103080251 (DHX58)
SSDB
Motif
Pfam: RIG-I_C-RD RIG-I_C ResIII DEAD Helicase_C SWI2_SNF2 AAA_19 AAA_22 Terminase_6N BBP1_C
Other DBs
NCBI-GeneID: 103080251
NCBI-ProteinID: XP_007447228
UniProt: A0A340WCF1
Position
Unknown
AA seq 680 aa
MELRPYQWEVIMPALEGKNIIIWLPTGSGKTRAAAYLAKRHLETVDGAKVVVLVNRVHLV
TQHREEFSNMLGKRWTITTLSGDMGPRAGFGHVARRHDLLICTAELLQKALTSLEEGEHV
ELNAFSLLVVDECHHTHKDTIYNVILSRYLELKLRRTRPLPQVLGLTASPGTGGASTLDG
AIDHVLQLCANLDTWRIMSPQDYRSQLQHSHQPCKQYDLCHRRTQDPFGDMLKELMDQIH
DHLEMPELRRDFGTQTYEQQVVELSREAAEAGLQERRVYALHLRRYNDALLIHDTVRAVD
ALATLQDFYDRERTTKTRILRAERWLLALFDDHKNKLAHLATRGPENPKLEVLEEILQQQ
FRSPDSLRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRPQLLIGAGNSSQSAQMIQMTQR
DQQEVIQKFRTGALNLLVATSVAEEGLDIPQCKVVVRYGLLTNEISMVQARGRARASQSV
YSFVAAQGSRELKRELTNEALETLMERAVAAVQEMDRAKYQDKIQDLQRAALVKRTAQAA
QRESHQHKFLAEHVRLLCVNCTVPVGYGSDLRRVEGTHHVNVNPNFSIYCNVSQEPVVIN
RVFKDWRPGGVISCRNCGEGWGLQMIYKSVKLPVLKVRSLLLETPQGRVQSKKWSRVPFT
VPDFDYVQHCAQSLADFSLD
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcatttggctgcccacgggctctgggaagaccagggcagctgcttatttggccaagagg
catctagagactgtagacggagccaaggtggttgtattggtcaacagggtgcacctggtg
acccagcatcgtgaggagttcagcaacatgctgggcaaacgctggaccattacaaccctg
agtggggacatggggccacgagctggctttggccatgtggcccggaggcacgacctgctc
atctgcacggctgagctgctgcagaaggcactgaccagcctggaggagggggagcatgtg
gagctcaacgccttctccttgttggtggtggatgagtgtcaccacacgcacaaagacacc
atctacaacgtcatcctgagccggtacctggagcttaaactccggaggacccggccgctg
ccgcaggtgctgggtctcacagcctcaccaggcactggcggggcctccacgctcgatggg
gccattgaccacgtcctgcagctctgtgccaacctggacacgtggcgcattatgtcaccc
caggactaccgctcccagctgcagcacagccaccagccctgcaaacagtacgacctctgc
catagacgcacccaggatccgtttggcgacatgctgaaggagctcatggaccaaatccac
gaccatctggagatgccggagttgagacgggacttcgggacgcagacctacgagcaacaa
gtggtggagctgagccgggaggcggctgaggcggggctccaggagcggcgggtgtacgcg
cttcacctgcgtcgctacaacgacgcactgctcatccacgacacggtccgtgcggtggac
gccctggccactctgcaggatttctacgacagggagcgcaccactaagacccggatcctg
cgtgccgagcgctggctgctggcgctgtttgatgaccacaagaataagctggcccacctg
gcaactcgtggcccagagaacccgaaactggaggtgctggaagagatcctgcagcagcag
ttcaggagccctgacagcctccggggcatcatcttcacccggacccgccagagtgctcac
tccctcctgctctggctccagcagcagccaggcctgcagacagtggacatcaggccccag
ctgttgattggggctgggaacagcagccagagcgctcagatgatccagatgactcagagg
gaccagcaagaagtgatccagaagttccggactggtgccctgaacctcctggtggctacg
agtgtggcagaggaggggctggacatcccccagtgcaaggtggtggtgcgctatgggctc
ctgaccaatgagatctccatggtccaggcaaggggccgtgcccgggccagccaaagtgta
tactcatttgtggcggcccaaggtagtcgggagctgaagcgggagctgaccaatgaggcg
ctggagactctgatggaacgggcagtggctgctgtgcaggagatggaccgggccaagtac
caggacaagatccaggatctgcagcgggcagccttggtcaagcggacagcccaggcggcc
cagcgggagagtcaccagcacaagttcctggcagagcacgtgcggctcctctgtgtcaac
tgcacggtgcccgtgggctatgggagtgacctacggagggtggagggtacccaccacgtc
aacgtgaaccccaacttctcgatctactgcaacgtctcccaggagcctgtggtcatcaac
agagtcttcaaggactggaggcctgggggtgtcattagctgcaggaactgtggggagggc
tggggtctgcagatgatctacaagtcagtgaagctgccagtactcaaagtccgcagcttg
ctgctggagacaccgcaagggcgggtccagtccaagaagtggtcccgcgtgcccttcacc
gtgcctgactttgactacgtgcagcactgtgcccagagcctggcagacttctccctggac
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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