KEGG   Lipotes vexillifer (Yangtze River dolphin): 103081672
Entry
103081672         CDS       T03090                                 
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
  KO
K10696  E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lve04121]
    103081672 (RNF40)
Enzymes [BR:lve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103081672 (RNF40)
Ubiquitin system [BR:lve04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   BRE1 proteins
    103081672 (RNF40)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 BRE1 zf-C3HC4_2 EzrA zf-RING_5 zf-RING_2 zf-RING_UBOX zf-rbx1 SpoIIE
Other DBs
NCBI-GeneID: 103081672
NCBI-ProteinID: XP_007452773
UniProt: A0A340X0D7
Position
Unknown
AA seq 1001 aa
MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRHHESQGELSS
GTEAPGTQEGPTRDETPLTEPGTSELREPLPMQLRPPLSEPALAFVVALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLQRQVEELCQRVYSQGDSEPPSEAARARTRELGRENRRL
QDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSSGFHGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIAKLRAQASGSTHSIPTLGHPEDSGL
SAPAPGKEEGGPGPVGAPDARKEMASMPGAAITTSLVKKEDLVPSEEEAQALTPGAQGPS
SRGREPEAKPKRELREREGPGLGPPSVASALSRTDREKVKVEEAKRKESELLKGLRAELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESKK
IADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLR
EKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQG
SLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREK
ESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVL
TKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgtctgggcccggcaacaaacgcgccgccggcgatgggggctcggggcccccagagaag
aagctgagtcgcgaggagaagaccacaaccacgcttatagagcccattcgtcttgggggc
atctcttctacggaggagatggacttgaaggttttgcagttcaagaataagaaactggca
gagcggttggaacagagacaggcttgtgaagatgaactccgagaacgaattgagaagttg
gagaagcggcaggccacagatgacgccacactcctcattgtcaatcgctactgggcccag
ctggatgaaactgtggaagcccttctccgacaccatgagagccagggggagctgtcttca
gggacagaggcgcctgggacccaggaggggccaacacgtgatgagacccctctcacagag
ccagggacatcggagctgagggagcccctgccaatgcagctgcggccacctctcagtgag
ccagccttggcttttgtggtggccctgggtgcaagcagtagtgaggaggtggagctgcag
ctgcagggccgcatggaattctccaaggcagctgtgtcccgtgtcgtggaggcctctgac
cgcctacagcgccaggtggaggaactctgtcagcgagtatacagccaaggggacagtgag
ccccccagtgaggcggctcgggcacgcacccgggagctgggccgtgagaaccggcggctg
caggacttggccacccagctacaggagaagcaccaccgcatctcgttggagtactctgag
ctccaggataaagtgacatctgcagagaccaaagtgctggagatggagacaacagtagaa
gacctgcagtgggacattgagaagttgcggaagcgtgagcaaaagctcaataagcaccta
gcggaggccttggagcagctcaattctggctactatgtatctgggagctcctcaggcttt
catgggggccagatcacactcagcatgcagaagtttgagatgctgaatgcggagttggag
gaaaaccaggaattggccaatagccgcatggcagagctggagaagctgcaggcggaactt
cagggggctgtgcggaccaatgagcgcctcaaggtagccctgcggagccttcctgaggag
gtggtacgggagacaggggagtaccgaatgctgcaggcgcagttctcactgctctacaat
gagtctctgcaagtgaagacccagctggacgaggcccgtgggctgctgctggccaccaag
aattcccacctgaggcacattgagcacatggagagtgatgagctggggctgcagaagaag
ctgcgcacagaggttatccagctggaggatacgctggcccaggtacgcaaggagtacgag
atgctgcgcatcgagtttgaacagaacctggcggccaacgagcaggcggggcccatcaac
cgggagatgcggcacctgatcagcagcctccaaaaccacaaccaccagctaaagggggac
gctcagcgatacaagcggaagctgcgggaagtgcaggctgagattgccaagctccgggcc
caggccagtggctctacccactccatccccaccctgggccacccggaggactctggcctg
agtgctccagccccagggaaagaagagggtgggccaggccctgttggtgcccctgacgcc
agaaaggagatggcttcaatgcctggcgctgccattactacctccttggtgaagaaggaa
gacctggtcccttctgaggaagaggcccaggccctgacccccggggcccagggcccctcg
tctcggggccgagaacctgaggctaaacccaagcgggagcttcgggagcgggaagggcct
gggctgggacccccatctgtagcctcagctctctcaaggactgatcgggagaaggtcaag
gtggaggaggccaagaggaaggagtcagagctcctcaaaggtctccgagcagagctcaag
aaggcccaggaaagtcagaaggagatgaaactgctgctggacatgtataagtctgcaccc
aaggagcagcgggataaggtgcagctcatggcagcagaacgcaaggccaaggctgaggtt
gatgagctacggagccgcatccgggaattagaggagagggatcggagggagagcaagaag
atcgcggatgaggatgccctgcggcgcattcgtcaggcagaggagcagatagaacacctg
caacgcaagttgggtgccaccaagcaggaggaggaggctctgctctcagagatggatgtg
acaggccaggcttttgaggacatgcaggagcagaatgggcggctgctacagcagttgcgg
gaaaaggacgatgccaactttaagctgatgtcagagcggatcaaggccaaccagattcat
aagctgctgcgggaggagaaggatgagctgggcgagcaggttcttggcctcaagtcccag
gtggatgcccagctgctgaccgtgcagaagctggaggaaaaagagcgggccttgcagggc
agcctcgggggtgtggagaaggagctgacactgcgcagccaggccctggagctcaacaag
aggaaggctgtggaagcagctcagctggccgaggacctgaaggtacagctggagcacgtg
cagacacggctgcgagagatccagccttgtctggcagagagccgggctgcccgtgagaaa
gagagcttcaacctcaagagggctcaggaggacatctcacggctgcggcgcaagctggag
aagcagaggaaggtggaggtttacgcagatgccgatgaaatcctccaggaggagatcaag
gagtacaaggcgcggttgacctgcccctgctgtaacacccgcaagaaggatgcagtcctc
accaagtgcttccacgttttctgcttcgagtgcgtacggggccgctatgaggcccgccag
aggaagtgccccaagtgcaacgcagcctttggtgcccatgacttccaccgtgtctacatc
agctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

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