KEGG   Lipotes vexillifer (Yangtze River dolphin): 103084506
Entry
103084506         CDS       T03090                                 
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
  KO
K12856  pre-mRNA-processing factor 8
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103084506 (PRPF8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lve03041]
    103084506 (PRPF8)
Spliceosome [BR:lve03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103084506 (PRPF8)
 Complex C
   U5 SnRNP specific factors
    103084506 (PRPF8)
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 103084506
NCBI-ProteinID: XP_007454276
UniProt: A0A340WYY7
Position
Unknown
AA seq 2335 aa
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq 7008 nt   +upstreamnt  +downstreamnt
atggccggagtatttccttaccgagggccgggtaacccggtgcctggccctctagccccg
ctgccagactacatgtcggaggagaagcttcaggagaaagcccgaaaatggcagcaattg
caggccaagcgctatgcggaaaagcggaagtttggatttgtggatgctcagaaagaagac
atgcctccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtgtacttgggtgccctaaagtacatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttcctttgtcaatgagattccctgggttattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccgcctttggactatgctgac
aacattttagatgttgagccactggaggcaattcagctagagctggaccctgaggaagat
gccccggtgttggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggttccacttaccaacgctggcagttcacactgcctatgatgtccactctctaccgc
ctggccaatcagctcctgacagacttggtagatgacaattacttctatctgtttgatctg
aaggccttttttacctccaaggccctcaatatggccattcctggaggccccaaatttgag
cctcttgtccgagacatcaacctacaggatgaagactggaatgaattcaatgatattaac
aagatcattatccggcagcccatccgcactgagtacaagattgcttttccttacttgtac
aacaaccttccacaccatgtccacctcacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
cataggcactctgtcaagagtcaggaaccattgccagatgacgacgaggagtttgagctc
ccagagtttgtggagcccttcttgaaagacacacccctctacacagacaatacagccaat
ggcattgccctgctttgggccccacggcccttcaacctacgctctggtcgcacccgccgg
gccctagacattccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcgcaaaagaagaggtatctgttccgttccttcaaagccaccaaa
ttctttcagtctacaaagctggactgggtggaggtggggctacaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgcaaaaatctcaactatctgcacctggactac
aacttcaacctcaagcctgtcaagacactcaccaccaaggagcgaaagaaatctcgtttt
gggaatgctttccatctgtgtcgagaggttctgcgcttaactaagctggtggtggacagt
cacgtgcagtatcggttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcccacgtggggcagctgacgggcatgtaccggtacaaatataagctgatgcgc
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggccct
gtagggaagggccctggctgtggtttctgggctgctggctggcgagtctggctgtttttc
atgcgtggcatcacccctttgctggagcgatggctgggtaacctcctggcccggcagttt
gaaggccgacactcaaagggggtggcaaagaccgtaacaaagcagcgagtggagtcacat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgagggg
atcaaacagaacaaggcccggacaatcctgcaacacctcagtgaagcctggcgctgctgg
aaggccaatattccctggaaggtccctggtttgccaacacctatagagaatatgatcctt
cgatacgtgaaggccaaggctgactggtggaccaacactgcgcactacaaccgagaacgg
atccgccgtggggccactgtagacaagactgtttgcaaaaagaacctgggacgcctcact
cggctctacctgaaggcagaacaagagcggcagcacaactacctaaaggacgggccttac
atcacagcagaagaagcggtggcagtgtataccaccactgtgcattggctggaaagccgt
aggttctcacccatcccattccccccactgtcctacaagcacgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtcgcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccatgaggcactgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgccagtgtatgatgtagagccactggagaagataactgatgcc
tacctggaccagtacctgtggtatgaagctgacaagcgccgccttttcccaccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggacgtgtgggagacaagtgagggcgagtgcaacgtcatgctggagtcccga
tttgagaagatgtatgagaagatagatttgaccctgcttaatcggctgctgcgcctcatc
gtggaccacaacatagccgactacatgacagccaagaacaatgttgtcatcaactacaag
gacatgaaccatacgaattcatatgggatcattagaggcctgcagtttgcctcattcatc
gtacagtactatggcttggttatggatttgcttgtgttgggattgcaccgggccagtgag
atggctgggccccctcagatgccaaacgattttctcagtttccaagacatagccactgag
gctgcccaccccatccgtcttttctgcagatacatcgatcgcatccatatttttttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcaccctgacccc
aacaatgaaaacatcgttggctataataacaagaaatgctggccccgagacgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacgctcagtgactacagttcagtgggagaacagcttcgtgtccgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggttttgagtgccgcatcctgcctaaatgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctacagaatgaggtt
actaaagagcgaacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacacagctcttattggccttatgacctactttcgggaggctgtggtgaac
acccaggagctcctggacttgctggtgaagtgtgagaacaagatccagacacgaatcaag
attggcctcaactccaagatgccgagtcgcttcccccctgtcgtgttctacacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtgctcatcccccaatctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtatcgctacatacagccctgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccattgcgcagaac
agacgactgaccctagaagatctagaggattcgtgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacactggcttatgataagggttggcgtgtccgaact
gactttaagcagtaccaggttttgaagcagaaccctttttggtggacacaccagcggcat
gatggaaagctctggaacctgaacaactaccgtacagacatgatccaggccctcggtggt
gtggaaggcattctggaacacactctcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtctatgaagtggaagaaactaaccaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcacgctctggtggtcccca
accatcaaccgagccaacgtatacgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcatggcaagatccccacactgaagatctctctcatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatcgttatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactggaaattgagacagtacaaaaggagacaatccacccccgaaagtcctat
aagatgaactcttcctgtgccgatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcattgctggcagactctaaggatgtgatggacagcaccaccactcaaaagtat
tggattgacatccagctgcgctggggggactatgattcccatgacattgagcgctacgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcgcccacaggt
gtgctcattgccatcgacctggcctataacctgcatagtgcctatggaaactggttccct
ggcagcaagcccctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgtaaagggctgcagctttattcatctgagcccactgag
ccctatctgtcctctcagaactatggtgagctcttttccaaccagattatctggtttgtg
gatgacacgaatgtctacagagtgactatccataagacctttgaagggaacctgaccacc
aagcccatcaatggggccatcttcatcttcaacccacgcacagggcagctgtttctcaag
ataattcacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaggtggctgccctgatccgatctctgccagtggaggagcagcccaagcag
atcattgtcaccaggaaaggcatgctcgatccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcagagctccagctccccttccaggcttgtctcaaggtggaa
aagtttggggatctcatccttaaagccactgagccgcagatggttctctttaacctctat
gatgactggctcaagactatctcatcttacacggctttctcccgcctcatcctgattctg
cgtgccctgcatgtgaacaacgaccgggcgaaggtcatcctgaagccagacaagactaca
atcacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaggaccttatcttggctgactatggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaattcgagacatcatcctgggtatggagatctctgcaccatca
cagcagcggcagcagatagctgagattgagaagcagaccaaggaacagtcacagctgact
gcaacccagactcgtactgtcaacaagcatggtgacgaaatcatcacctctaccaccagc
aactatgagacccagactttctcatctaagactgaatggagggtcagggccatctctgcc
gccaacctgcacctaaggaccaaccatatctatgtttcatctgatgacatcaaggagact
ggttatacctatattcttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcagggtacctctatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtaccacagtggggcactcaccagactgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaacgagtccccccagctgtcaccccaggatgtcaccacccatgccaagatcatg
gctgacaacccatcttgggatggcgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcaccctgacagcctacaagctgacccccagtggctatgaatggggccgccag
aacacagacaagggcaacaaccccaagggctacctaccctcgcactacgagagggtccag
atgctactgtcagaccgcttccttggcttctttatggtccctgcccagtcctcatggaac
tacaactttatgggtgttcggcatgatcccaacatgaagtatgagctgcagctggcaaac
cccaaagagttctaccacgaggtgcacaggccctcccacttcctcaactttgctctcctg
caggagggtgaggtctactctgcggaccgagaggacctctacgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (294)   
   KEGG ORTHOLOGY (1)   
   RefGene (290)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (311)   

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