KEGG   Lipotes vexillifer (Yangtze River dolphin): 103085386
Entry
103085386         CDS       T03090                                 
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lve03009]
    103085386 (DDX54)
Enzymes [BR:lve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103085386 (DDX54)
Ribosome biogenesis [BR:lve03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103085386 (DDX54)
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT ResIII DNA_pol3_chi
Other DBs
NCBI-GeneID: 103085386
NCBI-ProteinID: XP_007468632
UniProt: A0A340Y895
Position
Unknown
AA seq 876 aa
MAAGTRPAAAPRSRAAMAQWRKKKGLRKRRGAASQSRSSDSEDGEFEIQAEDDARAQKLG
PGRPLPTFPTLECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLMEPVLIR
LDVDSKLSEQLKTSFFLVREDAKAAVLLHLLRSLVRPQDQTVVFVATKHHAEYLSELLTT
QRVSCAHIYSALDQTARKINLAKFMHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPHEEPSGAGGGDGVL
GRVPQGVVDDEDCSLRTSLETSLELRGLGRVANNAQQQYVRSRPAPSPESIKKAKELDLS
GLGLHPLFSSCFQEEELQQLRLVDSIRNYRSRATIFEINASSRDLSSQVMRAKRQKDHKC
IASFRQKRQERQEGPAIPALSLPAPQEEQPEKEEAAGDSVEDLFTEVVGRKRQQPGPDQG
AKRRREEARQRDQVFYIPYRPKDFDSERGLSIGGDGGAFEQQVAGAVLDLMGDEGQSLTK
GQQQLKWDRKKKRFVGQSGQEDKKKIRTESGRYISSSYKRDLYQKWKQKQKIDDRDSEEE
GTFDRRGPERRGGKRGRGQGASQPRTSGAPTGHVRSELKTKQQILKQRCRAQKLRFLQRG
GLKQLSARNRRHARELQQGAFGRGTRSKKGKMRKSL
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggctgccggaacgcgtccggcggccgcaccgcggtcccgagctgccatggcccagtgg
aggaagaagaaggggctcaggaagcgccggggcgcggcctctcagtcccgcagcagcgac
tcggaggacggcgagtttgagattcaggcagaagatgacgcccgggcccagaagctggga
cccggcagacccctacccaccttccccaccttggaatgcacctcggacgtggagccggac
acacgggagatggtacgagcccagaacaagaaaaagaagaagtcgggaggcttccagtcc
atgggcttgagctacccagtgttcaaaggcatcatgaagaagggctacaaggtgccaaca
cccatccagaggaagaccatcccagtgatcctggatggcaaggatgtggtagccatggcc
cggacaggcagtggcaagacggcctgcttcctcatccccatgttcgagaggctcaagacc
cgcagcgcccagaccggggcccgcgccctcatcctctcacccacccgagagctggccctg
cagaccatgaagttcaccaaggagctgggcaagttcactggcctcaagactgccctgata
ctgggcggggacaagatggaagaccaatttgcagccctgcacgaaaatcccgacataatc
attgctacccctgggcgcttggtgcatgtggctgtggagatgaacctaaagctgcagagc
gtggaatatgtggtatttgatgaggctgacaggctctttgaaatggggttcgcagagcag
ctgcaggaaatcattgcccgcctccctgggggccaccagactgtcctgttctctgccacg
ctgcccaagctgctggtggagttcgcccgggctggcctcatggagcccgtgctcatccgg
ctagacgtggactccaaactcagtgagcagctcaagacctccttcttcctcgtgcgggag
gatgccaaggctgctgtgctgctccacctgctgcgcagcctggtgcggccccaggaccag
acagtggtatttgtggccaccaagcaccacgcggagtatctcagtgagctgctgacgacc
cagcgggtgagctgcgcccacatctacagcgccctggaccagacggcccgcaagatcaac
ctggccaagttcatgcacggcaagtgctcggccctcatcgtgactgacctggcagcccgg
ggcctggacatcccactgctggacaatgtcatcaactatagcttcccggccaagggcaag
ctcttcttgcaccgcgtgggccgtgtggcccgggctggccgaagcggcacggcctactcc
ttggtggccccagatgaggtcccctacctgctggacctgcacctgttcctgggccgtgcc
ctgaccctcgcccgtccccacgaggagccctctggtgcgggcggcggggacggcgtgctg
ggccgggtgccgcagggcgtggtggacgatgaggactgcagtctgcggaccagcctggag
acgtcgctggagcttcggggcctgggccgcgtggccaacaacgcccagcagcagtatgtg
cgctcgcggccggcgccctcgcccgagtccatcaagaaggccaaggagctggacctctcg
ggcctgggcctgcaccccctcttcagttcgtgcttccaggaggaggagcttcagcagctg
cggctggtggacagcatcaggaactaccgctcccgggcgaccatctttgagatcaacgct
tccagccgggacctgagcagccaggtgatgcgtgccaagcggcagaaggatcacaaatgc
atcgccagcttccggcagaagcggcaggagcggcaggagggcccggccatcccagccctg
agcctcccagcaccgcaagaggagcagcctgagaaggaggaggcggcaggagacagtgtg
gaggacctcttcacagaggttgtgggccggaagcggcagcagccaggacccgaccaagga
gccaagaggcggagggaggaggcccggcagcgggaccaggtgttctacatcccctaccgg
cccaaggactttgacagcgagcggggcctgagcatcggtggggacgggggtgccttcgag
cagcaggtggctggcgctgtcttggacctgatgggggacgaaggccagagcctgaccaag
ggccagcagcagctcaagtgggaccggaagaagaagcggtttgtgggacagtcgggacag
gaggacaagaaaaagatcaggacagagagtggccgctacatcagcagctcctacaagagg
gacctctaccaaaagtggaaacagaagcagaaaattgatgatcgtgactcagaagaagaa
gggacatttgaccggcgtggcccagagcgaagaggtggtaagcgcggccgagggcaaggt
gcatcccagccccgcacctctggtgcccccacaggccacgtgcgctcagagctcaagacc
aagcagcagatcctgaagcagcggtgccgagcccagaagctgcgcttcctgcagcgtgga
ggcctcaagcagctctctgcccgcaaccggcgccatgcccgggagctgcagcagggcgcc
ttcggccggggcacccgctccaagaagggcaagatgaggaagagcctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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