KEGG   Lipotes vexillifer (Yangtze River dolphin): 103090107
Entry
103090107         CDS       T03090                                 
Symbol
TRIM4
Name
(RefSeq) tripartite motif-containing protein 4
  KO
K11998  tripartite motif-containing protein 4 [EC:2.3.2.27]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lve04121]
    103090107 (TRIM4)
Enzymes [BR:lve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103090107 (TRIM4)
Ubiquitin system [BR:lve04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103090107 (TRIM4)
SSDB
Motif
Pfam: SPRY zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-B_box zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 PRY zf-RING_5 zf-RING_10 zf-RING_6 zf-Nse TRAF3_RING Sina_RING
Other DBs
NCBI-GeneID: 103090107
NCBI-ProteinID: XP_007468965
UniProt: A0A340YC04
Position
Unknown
AA seq 500 aa
MEAEDFQEELTCSICLDYFEDPVSIECGHNFCRGCLRRSWAPSGSPVPCPECRQPSAPAA
MRPNWALARLTERMRRRRLGPAPHGLCGRHWEPLRLFCEDDQRLVCLVCRESQEHQAHTM
APVDEAFASYRKVHCGIHRDEWRRPIGLLLHYLKQEEKLLKTQRSLTAKMNKAMHLQDME
VKNAAEWKEKMKNTRTRVSAEFAKLHVFLAEEEQLFLKRLSREEEEAKKKQDENTLRLRQ
MIASMKKLIFEVGEKSQSSTLELLQNPKDVLTRCENQDVNYSFEVLKVKTVCRLPMMKEM
LKRFQVAVNLAEDTAYPQLVFSQEGRYVKNGASASSWPLFTTAWSYFTGWRNPQRTTDFV
ERFQHLPCVLGKNVFTSGKHYWEVEHQGSLEVAVGLCREDITGITGGSTMSPRMGIWALC
WSSAGYWPLTGISVRPTKLEPALHRVGVFLDHRAGEISFYSAVDGEHLYTFSCPSISRLR
PFFWLSPLASLVIPPATGGK
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggaggccgaggatttccaggaggagctgacctgctccatctgcctggactatttcgag
gacccggtgtccatcgagtgcggccacaacttctgccgcggctgcctgcgccgcagctgg
gcgccgagcggcagcccggtcccctgccccgagtgccggcagccgtcggcgcccgctgcg
atgcggcccaactgggccctggccaggctgacggagaggatgcggcgccggcgcctgggc
cccgcgccccacggcctgtgcggccgccattgggagccgctgcggctcttctgcgaggac
gatcagcggctcgtgtgcttggtgtgcagggagtcccaggagcaccaggcccacaccatg
gcccccgtcgacgaggccttcgcgagctaccggaaagttcactgtggcatccaccgggat
gaatggagaagaccaattgggctgctgttgcactacctcaagcaagaggaaaaacttctg
aagacccaacgtagtctgacagccaagatgaataaagccatgcatttacaggacatggaa
gtgaagaatgctgcagagtggaaggagaagatgaagaatacgcgaacgagagtcagtgcg
gagtttgcaaagctgcacgtcttcctggctgaagaagagcaattgtttcttaagagactg
agccgagaagaagaagaggcaaagaagaaacaggatgagaacacgttacggctccgtcaa
atgatcgcttccatgaagaagctcatcttcgaggtgggggagaagagccagagctccacc
ctggagctgctccagaatccaaaagatgtgttgaccaggtgcgagaaccaggatgtgaac
tattcctttgaagttctaaaggtgaagactgtgtgccggctaccaatgatgaaggaaatg
ctgaagcgatttcaagtggctgtaaatctagctgaggacactgcttatccccaactcgtc
ttctcccaggaagggagatatgtgaaaaatggagcatcagccagttcttggccactgttt
actacagcgtggagctactttactggatggaggaatcctcagaggaccacagactttgtg
gagagatttcagcacttaccctgcgttttgggaaaaaacgttttcacttcagggaaacat
tactgggaagttgagcaccagggtagcctggaggttgctgtggggttgtgtcgggaggac
atcacggggattactggtggttcaacaatgtccccccgcatgggaatctgggctctttgt
tggagttctgctggctattggcccctgacaggcatctctgtgaggcctaccaagctagag
ccagctcttcaccgggtgggagttttcctagatcacagggctggggaaatctcattctac
agtgctgtggatggagaacacctgtacactttttcctgtccttccatctcacgtctccgg
ccgtttttttggttgagtccattagcatctttagtcatcccaccagcgactggcgggaaa
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (51)   

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