KEGG   Leptonychotes weddellii (Weddell seal): 102730276
Entry
102730276         CDS       T08708                                 
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww03440  Homologous recombination
lww03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lww00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102730276 (BLM)
   03460 Fanconi anemia pathway
    102730276 (BLM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lww03032]
    102730276 (BLM)
   03400 DNA repair and recombination proteins [BR:lww03400]
    102730276 (BLM)
Enzymes [BR:lww01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102730276 (BLM)
DNA replication proteins [BR:lww03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    102730276 (BLM)
DNA repair and recombination proteins [BR:lww03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     102730276 (BLM)
    Bloom's syndrome complex (BTR)
     102730276 (BLM)
   FA (Fanconi anemia) pathway
     102730276 (BLM)
SSDB
Motif
Pfam: BLM_N BDHCT_assoc DEAD BDHCT RecQ_Zn_bind RQC Helicase_C HRDC ResIII SecA_DEAD
Other DBs
NCBI-GeneID: 102730276
NCBI-ProteinID: XP_030893985
UniProt: A0A7F8RKX0
Position
Unknown
AA seq 1342 aa
MAAVPQNNLQEQLQRHSAIKLNNKLSPSKPRSLGFTFKKKITTASNVSVTSVSVAKTPVF
NDKDVNVTEAFSFTGPPPLTTSQQTRPSDFKSAPAGQQTRRAVSKPLLPEVLQVSQGVLC
NTPNTPIVKKSSNATFKKLEFSSSSDSFITINDWDDMDDFDTSGNSKAFVTPCKNHFVRV
STAQKSKKSKRNFLKAQLPEANTGKADLTPSSSESKQACLTKKQNDDSEWFSNDVICIDD
DPNPEELIRGDAQESHPLKTHLGEERDGSEKKNLEETELHSVEKSPCVELDEDDYDTDFV
PPSPEEEVISASSSLKCFSMLKDLDTSGTKDSPSTSKDLLTPEGMTTQQPTQETSTDCDG
TKVRQTSLQQQLIHVMDQICKLVDTIPDDELKALDCGNELHQQRDIRRKLLAEADLNTRD
ASILASGWRCRPDSPGSPLEGMASVSALDAFPKGNSCPTGNSVKELNFPHLPSHSSSTRE
CLLATTPGKTGFSATTKNPLERPLFSPHLQKSFVSSNWAETPRIEKRNESSYFPGNVLTS
TAVKDQNKRAAPINDLEREIQAACDIDTFDIDGFDDDDDDDDWEDIMHNLAASKSSTAVC
QPIKEGRPVKPVSERISSAKTNCLPVASTAQNKNSESIQNYTDKSAQNLASRNLKHERFQ
SLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACV
SPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYV
TPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVP
VMALTATANPRVQKDILTQLKILQPQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ
ESGRAGRDGEISHCLLFYTYHDVTRLKRLILMEKDGNHHTRETHFNNLYSMVHYCENITE
CRRIQLLAYFGENGFNPDFCKKYPDVSCDNCCKTKDYKTRDVTDDVENIVRFVQEHSSSQ
GTRNKNHIGPSGRFTMNMLVDIFLGSKSAKIQSGIFGKGSTYSRHNAERLFKKLILDKIL
DEDLYINANDQPIAYVMLGNKAQTVLNGHLKVDFMETENSTSVKKQKALVAKISQREEVV
KKCLGELTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYG
AEVIPVLQKYSEWTLPAEDGSPRGSPGSRRGTRRRAAEEFDEETPVSSHYFANKTKNERK
RKRMSASQRPKRRKTSFGGSKTKGGFTVCRKTSSKSKSSNIFGPHSSVHGSQAASGATRK
LGIMAPPKPINRPFLKPSYAFS
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggccgctgttccccagaataatctacaggagcaactacagcgccattcagccatcaaa
cttaataacaaattaagtccttctaaaccgagatctttaggttttacttttaaaaagaaa
ataacgacggccagcaatgtatctgtcactagtgtgtcagtagcgaaaacacctgtgttc
aatgataaagatgttaatgtcactgaggccttttccttcactggacctccgcccctcacc
acaagtcagcagacaaggcccagcgacttcaaaagtgctccagcaggacagcaaaccagg
agagcggtttcaaaaccattattgccagaggtgttgcaggtttcacagggggtcttatgt
aatacgccgaacacaccaatcgtaaagaaatccagtaatgctactttcaagaaattagaa
tttagttcttcatcagattcttttattaccatcaatgattgggatgatatggatgacttt
gatacttctggaaattcaaaagcatttgttacgccatgcaaaaatcactttgtgagagta
agcactgctcagaaatcaaaaaagtctaagagaaactttttgaaagcacagcttcccgaa
gcaaatacaggaaaggctgatttgactccatcctcctctgaaagcaagcaagcatgtttg
actaagaaacagaatgacgactcggaatggttcagtaacgatgtgatttgcattgacgat
gaccccaatcctgaagagcttatacgtggagatgctcaggagagtcatcctttaaaaact
catttaggagaagaaagagatggtagtgaaaagaagaacttggaagaaacggaattacat
tcagttgagaagtctccatgtgttgagcttgatgaagatgattacgatacagactttgtc
ccaccttctccagaagaagaagtgatttctgcctcttcctctttaaaatgtttcagtatg
ttaaaggaccttgacacctctggcacaaaggatagtcctagcacatccaaggacttgcta
acgcccgaggggatgacaacgcagcagcccactcaagagaccagcacagactgtgacggt
acaaaagttagacagacaagtttgcagcagcagcttattcacgtgatggaccagatctgt
aaattagtcgatactattcctgatgatgaactgaaagctctggattgtgggaatgaactg
catcagcagcgggacataagaaggaagctcctggccgaagctgaccttaatacaagggac
gccagtattcttgcttcagggtggagatgcaggcctgactcacctggtagccctctggag
gggatggcatctgtttctgctctcgatgcatttccaaagggcaattcctgtcctacaggg
aattctgttaaggagttaaattttccacaccttccctcacattccagttccactagggag
tgtttactggctactaccccgggaaagacaggattctcagccaccacgaagaatcccctt
gaaagaccgttattcagtccccatttacagaagtcctttgtaagtagcaactgggctgaa
acaccaaggatagaaaaaagaaatgaaagctcttacttcccgggaaatgttctcacaagc
acggctgtgaaagatcagaataaacgcgctgcaccaataaatgacttagaaagagaaatc
caggctgcctgtgatattgacacttttgacatagatggctttgatgacgatgatgatgat
gatgactgggaagatattatgcataatttagcagccagcaaatcttccacagctgtctgt
caacctattaaggaaggtcggccagttaagccagtatcagaaagaatttcttcagccaag
acaaactgtcttccagtggcatctactgctcaaaataaaaactcagagtcaattcagaat
tacactgacaagtcggcgcaaaatttagcatccagaaatctgaaacatgagcgtttccaa
agtcttagttttcctcatacaaaagaaatgatgaagatttttcataaaaaatttggcctg
cataattttagaactaatcagctagaggcgatcaatgctgcgctgctgggtgaagactgt
tttatcttaatgcccactggaggtggtaaaagtctgtgttaccagctccctgcctgtgtc
tctcctggtgtcactattgtcatttctcccttgagatcactcatagtagatcaagtccaa
aagctgacttccttggatattccagctacatatctgacaggtgataagactgactcagaa
gcaacaagtatttacctgcaattatccaagaaagacccaattatcaaacttctatatgtt
actccagagaaggtctgtgcgagtaatagactgatttccactctggagaatctgtatgag
aggaagctcttggcacgttttgtcattgatgaagcacattgtgtcagtcagtggggacat
gattttcgccaagattataaaagaatgaatatgcttcgccagaagttcccttctgttcca
gtgatggcccttaccgccacagctaatcccagggtacagaaggacatcctcactcagctg
aagattctccaacctcaggttatctgtgcaacaatagcattcggaatggggattgacaaa
cccgacgtgcggtttgtgatccacgcgtctctccctaagtctgtggagggctactaccag
gagtccggcagagctgggagagacggggaaatatcgcactgcctgctcttctatacctat
catgatgtgacccgactgaagaggctcatactaatggaaaaagatggaaaccatcatacc
agagagactcacttcaataatttgtatagtatggtgcattactgtgaaaatataacagaa
tgcaggagaatacaacttttggcttactttggtgaaaatggatttaatcctgatttttgt
aagaaatacccagatgtttcttgtgataattgctgtaaaacaaaggattataagacaaga
gatgtgactgatgatgtagaaaatattgtcagatttgttcaagaacatagttcatcgcaa
ggaacaagaaataaaaaccatataggtccttctgggagatttactatgaatatgctggtc
gacattttcttggggagtaagagcgcaaaaattcagtcggggatatttggaaagggctct
acttactcacgacacaatgccgaaagactttttaaaaaactgatacttgacaagattttg
gatgaagacttatatatcaacgccaatgaccagccgattgcctatgtaatgctgggaaat
aaagcccaaactgtactaaatgggcatttaaaggtagactttatggaaacggaaaattcc
accagtgtgaaaaaacagaaagcgttagtggcaaagatatctcagagggaagaggtggtg
aagaagtgtcttggagaactgacagaagtctgcaaatctctgggaaaagtttttggtgtt
cactactttaatatttttaatactgtcactctcaagaagcttgcagaatctttatcttct
gatcctgaggttttgcttcaaattgatggtgttactgaagacaaactggaaaaatatggt
gcagaagtgattccagtattacagaaatactctgagtggacattgccagctgaggacggt
tccccacggggaagcccgggcagccgcagaggcaccagaagacgcgccgccgaggagttc
gatgaggaaacacccgtatcttctcactactttgcaaataaaaccaaaaacgaaagaaag
aggaagagaatgtcagcctcccaaaggcctaagaggaggaaaaccagctttggtggctcc
aagaccaaaggggggttcaccgtgtgcagaaagacatcttctaaaagtaaatcctccaac
atatttggaccccattcctctgtgcatggttctcaagcagcatcaggagccactagaaaa
ttggggattatggctccaccaaagcctataaatagaccgtttcttaagccttcatatgca
ttttcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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