KEGG   Leifsonia xyli subsp. xyli CTCB07: Lxx00140
Entry
Lxx00140          CDS       T00190                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lxx  Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lxx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Lxx00140 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lxx03400]
    Lxx00140 (mutM)
Enzymes [BR:lxx01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Lxx00140 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Lxx00140 (mutM)
DNA repair and recombination proteins [BR:lxx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Lxx00140 (mutM)
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zf-TFIIB Ribosomal_S13 Cys_rich_KTR SelB-wing_1 NFACT_N
Other DBs
NCBI-ProteinID: AAT88117
UniProt: Q6AHM8
Position
complement(13624..14487)
AA seq 287 aa
MPELPEVTALAADLEKRLSGHVIDRLSVVAFAALKTFDPSPDALHNATITSVSRHGKFLD
IAAGELHLIIHLARAGWIGWCQGPPPAPTGWPSKGPLAARLVLEDGSGLDITEAGTRKSL
SISVVRDPAEVPGVARLGPDPLDPAFTRDVFAAILAGQGRAQIKGVLRNQGLIAGIGNAY
SDEILHVAKMSPFKPAALTDDELDRLYTAVQSTLREALTRADGLAASELKSEKKSGLRVH
GRTGRPCPICGDTVREVIFADSTLQYCPTCQTSGKPLADRVLSRLLK
NT seq 864 nt   +upstreamnt  +downstreamnt
gtgcccgaactgccggaagtcacagccctcgccgccgaccttgagaaacggctgagcggg
catgtgatagatcggctgagtgtcgtcgcgttcgccgcgctgaagacattcgatccctca
cccgatgctcttcacaatgccacgatcaccagcgtctcacgtcacggcaagtttctcgac
atcgcggcgggcgaactgcatctcatcattcacctcgcccgcgcgggctggatcggctgg
tgtcagggtccgccgccagcacccaccggttggccgtcgaagggaccgctggcggcccgc
ctggtgctggaggacgggagcggactcgacatcacagaggccggaaccaggaaaagcctg
tccatctccgtggtccgcgatcccgccgaggtccccggcgtcgcccggctcggccccgat
ccactcgaccccgcattcacccgggacgttttcgccgccattctcgccggacagggtcgt
gcccagatcaaaggcgtcctccgcaaccagggcctcatcgccggaatcggcaacgcctac
tccgacgaaatcctccatgttgcgaagatgtcccccttcaagcccgccgctctgaccgat
gatgaactcgaccggctctacaccgccgtccaatcgacgctccgggaggcgctcacccgc
gccgatggcctcgccgcctcggaactcaagagcgagaagaagtctggcctccgcgtccac
gggcgaacgggccgcccctgtcccatctgcggagacaccgtccgcgaggtgattttcgca
gactccacgctccagtactgcccgacctgtcagaccagcggcaaaccgctggcggatcgc
gtactctcccggctgctcaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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