KEGG   Lysinibacillus sp. YS11: LBYS11_06175
Entry
LBYS11_06175      CDS       T05299                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lys  Lysinibacillus sp. YS11
Pathway
lys00740  Riboflavin metabolism
lys01100  Metabolic pathways
lys01110  Biosynthesis of secondary metabolites
lys01240  Biosynthesis of cofactors
lys02024  Quorum sensing
Module
lys_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:lys00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LBYS11_06175 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LBYS11_06175 (ribD)
Enzymes [BR:lys01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LBYS11_06175 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LBYS11_06175 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AUS85943
Position
1312961..1314073
AA seq 370 aa
MMNVDEKYMQLALDLAASAKGNTNPNPLVGAVIVKNGVIVGTGLHRKAGEPHAEVHAFRM
AGEHALGATLYVTLEPCSHYGKTPPCANLVKESGVSRVVIAMQDPNPAVAGRGIQLLQDA
GIMVEVGVLEQQARRLNERFIHNMLTHRPFVISKFAMTLDGKIATHTGHSKWVTGEGARE
DVHHIRHEVDGILVGVGTVIADNPSLTTRLKEGYGKNPTRIIMDSSLRTPDNANVLNTED
APTILVCSDDVSQEKIHLFTEKGVTVLPVQKNEYGLQIDEMLEKLYIHGITDILLEGGSK
MNASFLQQGAIDKYVVYIAPKVLGGNLSLTPFAGYNPSLMHEAWNVEFASFDKIGEDLRI
IAYPKQGEKK
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgatgaatgtagatgaaaagtatatgcaactggctttggatttagcagctagtgctaaa
ggaaatacgaaccctaatccacttgttggggctgtaatcgtgaagaacggtgtgattgta
ggtacaggtttacacagaaaagcaggggaaccacatgctgaagtgcatgcttttcgaatg
gctggagagcatgcactgggtgctacgttatatgtaacgttagagccttgttcacattat
ggtaagacacctccttgtgccaatttagtgaaggaatctggtgtcagtcgagtggtaatt
gctatgcaagatccaaatccagcagtagcaggtcgtggcatccaattgctacaagatgct
ggaataatggtggaagtgggggttttagagcaacaagcgcgccgtttaaatgagcgtttt
attcacaatatgcttacgcatcgtccttttgttatttcaaaatttgctatgactctagat
gggaaaattgctacgcatacaggacattcaaaatgggtaactggagagggtgcacgtgag
gatgttcaccatattcgtcatgaagtagatggaattttagttggcgtgggtacagtcatt
gctgataatccttctttaacaacaagactaaaagaaggatatggaaaaaacccaacacgt
attattatggatagttctctacgtacacctgacaatgcaaatgtcttgaatacagaggat
gcaccaacgattcttgtttgtagtgacgacgtaagccaagaaaaaattcatttatttaca
gaaaaaggtgttacagttttacccgtacaaaaaaatgaatatggattacagattgatgag
atgcttgaaaagctttatatacacggcataacagatattttgctagaaggtggaagtaaa
atgaatgcttcctttttacagcaaggtgcaatcgataaatatgtagtatatatagcacct
aaagttttgggtggaaatctatcgttaacgccgtttgctggctataatccctctctcatg
catgaggcatggaatgttgagtttgcatcatttgataaaataggcgaggatttgcgtatt
attgcctatccaaagcagggtgaaaaaaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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