KEGG   Lysinibacillus sp. YS11: LBYS11_22435
Entry
LBYS11_22435      CDS       T05299                                 
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
lys  Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:lys00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lys03009]
    LBYS11_22435
Enzymes [BR:lys01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     LBYS11_22435
Ribosome biogenesis [BR:lys03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LBYS11_22435
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 TruB_N
Other DBs
NCBI-ProteinID: AUS88861
Position
4465307..4466008
AA seq 233 aa
MRINKYLSETGIISRRGADKWIAEGKVTINGELATVGSQVETGDVVCVDGKEVKKEQQLV
YIALNKPVGITSTTERHIKGNVVDFVNHPLRIFHIGRLDKESEGLLLLTNDGDIVNKILR
AENHHEKEYIVQVDKPITAQFIQKMGAGVDILDTTTLPCHVEKISDKVFKIILEQGLNRQ
IRRMCSALGYSVKRLQRIRIMNIKLGNLKVGQWRDLTEKERTELFKLLNYTPK
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcgtattaataaatatttaagtgaaacaggcatcatatctcgtcgtggcgctgataaa
tggatagcagaaggaaaggtaacaattaacggagaactggcaacggttggtagtcaagtt
gaaacaggagacgttgtttgcgtggatggaaaagaggtaaagaaagaacaacagcttgtt
tacattgctctaaataaacctgtcggcattacaagtacgacagagcgtcatataaaaggc
aatgttgttgattttgtcaatcatcctctacgtatttttcatatcgggcgtcttgataag
gaatcagaggggctattattattaacgaatgatggtgatatcgtcaataaaattctacgt
gctgaaaatcatcatgaaaaagaatacattgttcaagttgataagcctataactgcgcaa
ttcatccaaaaaatgggtgcaggtgtcgatattttagatacaacaaccttaccatgccat
gtggaaaagatttcagataaagtatttaaaatcattttagagcaaggcttaaaccgccaa
attcgtcgaatgtgctcagcactagggtattccgttaagcgtctacaacgcattcgtatt
atgaatattaagcttggtaatttaaaggtagggcaatggcgtgatttaactgagaaggaa
cgaacagaactattcaaactactcaattacacaccaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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