KEGG   Levilactobacillus zymae: LZ3411_0696
Entry
LZ3411_0696       CDS       T05206                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
lzy  Levilactobacillus zymae
Pathway
lzy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lzy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LZ3411_0696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lzy03400]
    LZ3411_0696
DNA repair and recombination proteins [BR:lzy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LZ3411_0696
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LZ3411_0696
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_7 AAA_19 AAA_22 AAA_30 T2SSE AAA AAA_16 AAA_25 AAA_5 AAA_6
Other DBs
NCBI-ProteinID: SMS13746
UniProt: A0A1Y6JUX1
Position
I:776194..778200
AA seq 668 aa
MIDRQTDRKFDLVSDYQPTGDQPQAIKALTQGLNDHEKAQILLGATGTGKTFTISNVIKN
VNKPTLVLSHNKTLAGQLYGEFKQFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVIVVASVSSIFGLGDPTEYKNHVVSLRVGQEIERDALLRK
LVNIQFERNDYDFQRGRFRVHGDVVEIFPASRDERALRVEFFGDEIDRIREVDALTGEIV
GDREHVAIFPATHFMTNDDIMATATAGIEGELKDRLAELEGQGKLLEAQRLKQRTTYDVE
MMREMGYTSGIENYSRWMDGRKAGEPPYTLLDFFPKDFLLVVDESHVTMPQVRGMYNGDQ
ARKQQLVDYGFRLPSALDNRPLKLSEFEQHVNQVIYMSATPGPYEEDQTNHVVQQIIRPT
GLLDPTIEVRPIMGQMDDLVGEINKRIDANERTFITTLTKKMAEDLTDYLKDLGIKVAYL
HSDIKTLERTQIMRDLRLGKYDVLVGINLLREGIDIPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNSHGAVIMYADSVTESMQAAIDETARRRKIQMAYNEKHGITPKTIIKPIRDL
IAVTKKSDDSGESDDFVANDFEDMDKDDQEKLIARLEDEMRAAAKKLDFEQAASLRDTIM
DMKTEIGD
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgatcgatcgacagactgatcggaagtttgatctggtttcggattatcaaccaacgggg
gaccaaccccaagccatcaaggcgttgacccaggggttaaacgaccacgaaaaggcccag
attttactgggggccaccgggacggggaagactttcaccatctcgaacgtgattaagaac
gtgaataaaccgacgttggtcttatcgcataacaagacgttagcgggccaactgtacggg
gaattcaagcagttcttcccccacaacgcggtcgagtattttgtgagttactatgattat
taccaacccgaagcctacgtgccgtctagtgacacctacatcgaaaaggactcctcgatt
aacgacgagatcgataagttacggcattcggccacgagttcgttgctggaacgtaacgac
gtgatcgtggtggcctccgtgtcctccatctttggattaggggatcccacggaatacaag
aaccacgtggtctcgttacgggtcggtcaggagattgaacgggacgcgttactccggaaa
ttagtcaacattcaatttgaacgcaacgactacgattttcaacggggccgcttccgggtc
cacggtgacgtggtcgaaatcttcccggcttctcgggacgaacgggccttacgggtcgaa
ttcttcggcgacgagatcgaccggattcgggaagtcgacgcgttgaccggtgaaatcgtg
ggcgacagagaacacgttgccatcttcccggcgacccactttatgaccaacgacgatatc
atggcgacggccacggccggtattgagggcgagttgaaagaccgcttagccgagctagag
ggccaaggtaagttgctggaagcccaacgcttgaagcaacggaccacctatgacgtcgaa
atgatgcgggaaatgggctacaccagcggaatcgaaaactattcgcgctggatggatggt
cgtaaagccggcgaaccgccgtacacgttactggacttcttccccaaggacttcttgctg
gtggtcgacgaatcacacgttaccatgccgcaggttcgggggatgtacaacggggaccag
gcccgcaagcaacaattagtggattacggtttccggctgcccagtgcgctggataaccgg
ccgctaaaactcagtgaatttgaacagcacgttaaccaagtgatttacatgtcggccacg
ccaggaccctacgaagaggaccagaccaaccacgtggtccaacagatcattcggccgacc
ggcttactcgacccgaccattgaagtccggcccatcatggggcaaatggatgatttggtg
ggcgaaatcaacaaacgcatcgacgccaacgaacggacgtttattaccacgttgaccaag
aagatggccgaagacttgaccgattatctcaaggacttgggcatcaaggtggcctacttg
cactccgacatcaagacgttggagcggacccagatcatgcgggacctgcgtttgggcaag
tacgacgtgttggtcggcatcaacctgttgcgggaaggaatcgacattcccgaagtctcg
ttggtcgctattttggatgccgacaaggaaggcttcctgcgtaacgaacggtcgttgatt
caaaccatcggtcgggcggcgcgtaactcgcacggggcggtcatcatgtacgccgacagt
gtcaccgaatccatgcaggccgccattgacgagacggcgcggcggcggaagattcagatg
gcctacaacgaaaagcacggcattacgcccaagacgattattaagccaattcgggacctg
atcgccgtcaccaagaagagtgatgacagcggggaaagcgatgactttgtggccaacgac
ttcgaggacatggataaggacgatcaagaaaagctgattgcccgcctggaagacgagatg
cgcgcggcggccaagaaattggacttcgagcaagcggcgtcgttacgggataccatcatg
gatatgaagacggagattggcgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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