KEGG   Mycobacteroides abscessus subsp. bolletii 50594: MASS_0459
Entry
MASS_0459         CDS       T02682                                 
Name
(GenBank) DNA topoisomerase I subunit omega
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mabb  Mycobacteroides abscessus subsp. bolletii 50594
Brite
KEGG Orthology (KO) [BR:mabb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mabb03032]
    MASS_0459
   03400 DNA repair and recombination proteins [BR:mabb03400]
    MASS_0459
Enzymes [BR:mabb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MASS_0459
DNA replication proteins [BR:mabb03032]
 Prokaryotic type
  DNA Topoisomerases
   MASS_0459
DNA repair and recombination proteins [BR:mabb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MASS_0459
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: AGM27061
UniProt: R4UPB2
Position
503985..506777
AA seq 930 aa
MRRLVIVESPTKARKIAGYLGDGYVVESSRGHIRDLPRAAADVPAKYKSEPWARLGVNVD
ADFEPLYIVSPDKKGTVTELKGLLKDVDELYLATDGDREGEAIAWHLLETLKPKVPVRRM
VFHEITEQAILAAAQDPRVLDNNLVDAQETRRILDRLYGYEVSPVLWKKVGRNLSAGRVQ
SVATRIIVQRERDRMAFRSAGYWDLGAELDAGKDNPAAKPPRFHARLVSVDALRVASGRD
FDSLGQVKETSNGPGVLVLDETRANALVAGLSQATLTVASAEEKPYTRKPYPPFMTSTLQ
QEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSDSALQAARSQAAELYGNEYVHP
SPRQYTRKVKNAQEAHEAIRPAGETFKTPGQLHSSLDNDEFRLYELIWQRTVASQMADAR
GTTLSLRLAGTATSGEQVVFTASGRTITFPGFLSAYVETVDELSGGEADDEERRLPQLKQ
GQSVTVAELSADGHTTNPPARYTEASLIKALEELGIGRPSTYSSIIRTIQDRGYVHKRGS
ALVPSWTAFAVIGLLEQHFGRLVDYDFTAAMEDDLDEIASGNERRTNWLNAFYFGGDHGV
EGSVARAGGLKRLVGVNLEEIDAREINSIKLFDDDQGRPIYVRVGKNGPYLERMVADPDG
EAGALIPQRANVKDGVTPDELTVEMAEQLFAIPQEGRTLGVDPETGHEIVAKDGRFGPYV
TEVLPAPPEPVEAEKPKRGAKKADGPKPRTGSLLKSMTLETVTLEDALKLLSLPRVVGVD
PANGEEITAQNGRYGPYLKRGTDSRSLATEDQIFTVTLDEALKIYSEPKRRGGQAASAAP
LRELGVDSATGKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERASELLADRRARGP
VKRAKKAPAKAAKKAPAKKAPAKKAAKKAT
NT seq 2793 nt   +upstreamnt  +downstreamnt
ttgcgacggctcgtcatcgtcgaatcaccgacgaaggcccgcaagatcgctggctacctc
ggcgacggatacgtcgtcgaatcttcgcgtggccacatccgggacctgccccgtgccgct
gccgacgttccggccaagtacaagtctgaaccctgggctcgcctcggggtgaacgtcgat
gcggatttcgagcccctctacatcgtcagcccggataagaagggcaccgtcaccgagctc
aagggcctgttgaaggacgttgacgagctctatctcgcgacggacggtgaccgcgagggt
gaggccatcgcctggcacctgctggagaccctcaagcccaaggtgcccgtccggcgcatg
gtattccacgagatcaccgagcaggccatcctcgcggcggctcaggacccccgtgtcctc
gacaacaacctcgtcgatgcgcaggagacccgccgcatcctggaccggctctacggctac
gaggtcagccccgtgctgtggaagaaggttggacgcaacctgtccgccggacgtgtgcag
tcggtggccacccggatcatcgtgcaacgcgaacgtgaccgcatggcgttccgcagtgcc
ggttattgggatctgggtgccgagctggatgccggcaaggacaacccggcggcaaaaccc
ccacgttttcatgcccggctggtcagcgtggacgccctgcgggtggcctcgggccgcgac
ttcgactcgctgggccaggttaaggagaccagtaacggcccaggggtgctggtcctcgat
gagacccgcgccaacgccctggtcgcggggctgtcgcaggccacgctgacggttgcctcc
gccgaggagaagccctacacgcgcaagccctaccccccgttcatgacctcgacgctgcag
caggaggccgggcgcaagctgcggttctcctccgagcgcaccatgagcatcgcgcagcgg
ttgtacgaaaacggttacatcacctatatgcgtaccgactccaccacgctctcggattcg
gcactgcaagcggcgcgatcacaggccgcggagttgtacggaaacgaatatgtgcatcct
tcgccacggcaatacacgcgcaaggtgaaaaatgcgcaggaagcgcacgaagccattcgt
ccggcgggtgagactttcaaaactccgggccaattgcattcgtcactcgataacgacgaa
ttccgtttgtacgagctgatttggcagcgcactgtcgcctcgcagatggcggacgcgcgc
ggtaccacgctgagcctgcggctagccggtaccgctacctccggcgagcaggtggtgttc
accgcgagcggtcgcaccatcaccttccccggcttcctgtccgcctacgtggagaccgtt
gacgagctcagcggtggcgaggccgatgacgaagagcgtcgtctgccgcagctcaagcag
ggccaaagcgtcaccgtggcggaactttccgcggacgggcacaccaccaacccgcctgcc
cgttacaccgaagcctcgctcatcaaggcactggaagagctcggtattgggcgtccgtcg
acctactcgtccatcatccggacgattcaggatcgtggatacgtgcacaagcggggtagc
gcgctggtcccgtcctggacggcattcgcggtgatcggattgctggaacagcacttcgga
cgcctcgtcgactatgacttcacagctgccatggaggacgacctcgatgagatcgcctcc
ggaaacgagcgccgcacaaattggttgaacgcgttctactttggtggcgaccatggtgtg
gagggctcggtggcacgtgccggcgggctcaagcggctggtcggtgtcaacctcgaggaa
atcgacgcccgcgagatcaactcgatcaagctgttcgacgacgaccaggggcgccccatc
tacgtgcgggtcggaaagaacggtccgtacctggagcggatggtggccgatccggacggt
gaagccggggcactcattccgcagcgcgccaacgtcaaggatggcgtcacccccgacgag
ctgaccgtcgagatggccgagcagctgttcgcaatcccgcaggaggggcggacgctgggt
gtcgacccggagaccggacacgaaatcgtcgccaaggacggacgtttcggtccctacgtc
accgaggtgttgccggccccgccggaacctgtcgaggcagagaagccgaagcggggagcc
aagaaggccgatggccccaagccccgcaccggctcgctgctcaagtccatgaccttggag
acggtgacgctcgaggatgcgctgaaactgctctcgttgccgcgtgtggtcggggtcgat
cccgccaacggtgaggaaatcaccgcgcagaacggtcgctatggcccatacctcaagcgt
ggcaccgactctcgctcgttggccaccgaggatcagattttcaccgtcaccctcgatgag
gcgctgaagatctactcggagcccaaacgccgtggtggacaggcggcttcggctgccccg
ctgcgcgagctgggggtggattcggcgaccggcaagccgatggtgatcaaggacggccgc
tttggcccctatgtcaccgacggtgagaccaacgcgagcctgcgtaagggtgatgacgtg
ctgtcgatcaccgacgagcgggcctccgagctactcgccgaccgacgtgcacgtgggccg
gtgaagcgggctaaaaaggcacccgcgaaggctgccaagaaggctccggccaaaaaggcg
cccgcgaaaaaggctgcgaagaaggcgacttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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