KEGG   Mycobacteroides abscessus subsp. bolletii 50594: MASS_1671
Entry
MASS_1671         CDS       T02682                                 
Name
(GenBank) formamidopyrimidine-DNA glycolase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
mabb  Mycobacteroides abscessus subsp. bolletii 50594
Pathway
mabb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mabb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MASS_1671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mabb03400]
    MASS_1671
Enzymes [BR:mabb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MASS_1671
DNA repair and recombination proteins [BR:mabb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MASS_1671
SSDB
Motif
Pfam: H2TH zf-FPG_IleRS Fapy_DNA_glyco Auto_anti-p27
Other DBs
NCBI-ProteinID: AGM28273
UniProt: R4UBY1
Position
1697542..1698339
AA seq 265 aa
MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFTEGAAAVNGRTFIKAHAWGKHLFHDYGP
VGVVHVHLGLYGAFTELPVPMGLPVGQVRMRIEGSEFGTDLRGATACELIDTPQVEAILA
RLGPDPLRPRSDPASAFERIAKSHRPIGALLMDQKIIAGVGNVYRSEVLFRRRIDPYREG
SRLDPEQLTALWGDLVGLMRVGLRVGKIVTVDPEYDCGDPSYAPDRPRTYVYRRAGAPCR
VCGTPILTAEMDARNLFWCPSCQIR
NT seq 798 nt   +upstreamnt  +downstreamnt
gtgccggagggccacaccctgcaccggctggcccggttgcaccagcgccggttcgccggt
gcgccggtgtctgtgagcagcccgcagggacggttcaccgaaggcgcggccgcggtcaat
ggacgtacctttatcaaggcgcacgcctggggtaagcatctgtttcacgactatggccct
gtcggcgtggtgcatgtgcaccttgggctgtatggcgcgttcacggaattacctgtgccg
atgggcctgccggttggtcaggtgcggatgcgtatcgaagggtccgagttcggtaccgac
ctgcgtggcgcgacggcatgtgagctcatcgacaccccgcaagtcgaggccatcctggcc
cgcctgggtcctgacccgctgcgtccccggtcggatccggcatccgcgttcgagcggatc
gccaagtcgcacaggccaatcggcgcactactgatggatcagaagatcatcgccggtgtg
ggaaatgtgtatcgcagcgaggtgctgtttcgtaggcggatcgatccgtaccgcgagggg
agccgcctcgatccggaacagctcaccgcgctctggggcgatctggtgggtctgatgcgc
gtcgggctgcgggtcggcaagatcgtcaccgtcgaccctgagtacgactgcggcgacccg
tcctatgctccggaccgcccgcgcacctacgtgtaccggcgtgcaggtgcgccgtgccgg
gtgtgcggaacgccgatcctcaccgcggaaatggacgcgcgaaacctcttctggtgtccc
tcatgtcaaattcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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