KEGG   Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_1598
Entry
MMASJCM_1598      CDS       T03694                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
mabl  Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mabl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MMASJCM_1598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mabl03400]
    MMASJCM_1598
Enzymes [BR:mabl01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MMASJCM_1598
DNA repair and recombination proteins [BR:mabl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MMASJCM_1598
SSDB
Motif
Pfam: H2TH zf-FPG_IleRS Fapy_DNA_glyco Auto_anti-p27
Other DBs
NCBI-ProteinID: BAP96374
Position
1611972..1612769
AA seq 265 aa
MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFTEGAAAVNGRTFIKAHAWGKHLFHDYGP
VGVVHVHLGLYGAFTELPVPMGLPVGQVRMRIEGSEFGTDLRGATACELIDTPQVEAILA
RLGPDPLRPRSDPASAFERIAKSHRPIGALLMDQKIIAGVGNVYRSEVLFRRRIDPYREG
SRLDPEQLTALWGDLVDLMRVGLRVGKIVTVDPEHDCGDPSYAPDRPRTYVYRRAGAPCR
VCGTPILTAEMDARNLFWCPSCQIR
NT seq 798 nt   +upstreamnt  +downstreamnt
gtgccggagggccacaccctgcaccggctggcccggttgcaccagcgccggttcgccggt
gcgccggtgtcggtgagcagcccgcagggacggttcaccgaaggcgcggccgcggtcaat
ggacgtacctttatcaaggcgcacgcctggggtaagcatctgtttcacgactatggccct
gtcggcgtggtgcatgtgcaccttgggctgtatggcgcgttcacggaattacctgtgccg
atgggcctgccggttggtcaggtgcggatgcgtatcgaagggtccgagttcggtaccgac
ctgcgtggcgcgacggcatgtgagctcatcgacaccccgcaagtcgaggccatcctggcc
cgcctgggtcctgacccgctgcgtccccgatcggatccggcatccgcgttcgagcggatc
gccaagtcgcacaggccaatcggcgcactactgatggatcagaagatcatcgccggtgtg
ggaaatgtgtatcgcagcgaggtgctgtttcgtaggcggatcgatccgtaccgcgagggg
agccgcctcgatccggaacagctcaccgcgctctggggcgatctggtggatctgatgcgc
gtcgggctgcgggtcggcaagatcgtcaccgtcgaccctgagcacgactgcggcgacccg
tcctatgctccggaccgcccgcgcacctacgtgtaccggcgtgcaggtgcgccgtgccgg
gtgtgcggaacgccgatcctcaccgcggaaatggacgcgcgaaacctcttctggtgtccc
tcatgtcaaattcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system