KEGG   Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_1631
Entry
MMASJCM_1631      CDS       T03694                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
mabl  Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mabl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MMASJCM_1631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mabl03019]
    MMASJCM_1631
   03009 Ribosome biogenesis [BR:mabl03009]
    MMASJCM_1631
Enzymes [BR:mabl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     MMASJCM_1631
Messenger RNA biogenesis [BR:mabl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MMASJCM_1631
Ribosome biogenesis [BR:mabl03009]
 Prokaryotic type
  rRNA processing factors
   MMASJCM_1631
SSDB
Motif
Pfam: RNase_E_G IF2_N S1 PCB_OB
Other DBs
NCBI-ProteinID: BAP96407
Position
1644500..1647349
AA seq 949 aa
MADYELPEDLHTSAPEGEHAALTPDTPPAPAEQGELPEKLRVHSLARVLGTSTRRVLDAL
SNLDGRARSPHSNVDKQDAAKVREVLANEAEAAPVVAEPPAPVAAEEAPAVVTGESADSA
EDPDNPPTTPILIAEATVIEAAAVPVPAAAAPTAYDYGPLFVAPQAPEPQERPAPARTEK
AEDVDEDAGEADDSDADGEGDGDRPARRRRRGRRGRGRGRGEQGGGEGSDDSGDDAAAEG
GEAADGDDAADGAGDDSSAPDGDESNAEDGDTPEGASRRRRRRRRRKAGSGDEGDGPSDD
DPPNTVVHERKPRAERGDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILTEAEFLARRE
AVDRVMVVRDKTRSEPPHEGARYTQIAVLEDGVLVEHFVTSAASASLVGNIYLGVVQNVL
PSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGSNRKIEQALKSGDYVLVQVSKDPVGHKG
ARLTTQISLAGRYLVYVPGASSTGISRKLPDTERQRLKEILRDIVPADAGVIIRTASEGV
REEDIRADVQRLQEQWQGIEQSATDLTSKASGAAVALYEEPDVLVKVVRDLFNEDFSKLI
IEGDAAWDTIDDYVKTVAPDLLSRIERYEGGEGPDVFTVHRIDEQLAKALDRKVWLPSGG
TLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEEIVRQLRLRDVGGIVVIDFI
DMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSSTCTHCA
GRGIVLHVDPVDNASNASSPAKKAETGRRAKRSRKGKTDDVVVARTPSHPQGEHPMFKAM
AAANGHHEDDEDADVNEDALDEDATDEVEEIVETVESAPGPQAPEAETEATPTDSEAAAE
PVVESTPEGIVPEPEAATEPATPEPAAETPTRPRRRRSAARAAGPPVEH
NT seq 2850 nt   +upstreamnt  +downstreamnt
gtggccgactatgagctaccagaagacctacacaccagcgctccagaaggggaacacgcc
gcgctgacgccggacaccccgcctgcccctgctgagcagggagaacttcccgagaagctg
agggtgcattccctggcgcgcgtcctgggaacctcgacacgccgcgtgctcgacgcactg
tccaacctggacgggcgcgcccgcagcccgcactccaatgtcgacaagcaggacgcggcc
aaggtgcgtgaggtgcttgccaatgaggcggaagcggctcccgtagtcgccgagccaccg
gccccggtggccgccgaggaagcgcccgccgtcgtcaccggcgagtcggccgattcggca
gaagaccccgacaacccgccgaccacgcccatcctcatcgccgaggcgacggtcatcgag
gccgccgcggtgccggtgccggcagccgctgcccccaccgcatacgactacgggccgctg
ttcgtggccccacaggctcccgagccccaggaacggcccgcgcccgcccgcaccgagaag
gcggaggacgtcgacgaggacgccggtgaggcggacgattccgacgccgatggcgagggt
gatggcgatcgtccggcacgtcgccggcggcggggacgccgtggccgtggccgtggacgc
ggcgaacagggcggtggcgaaggctccgacgactccggtgacgatgcggctgccgagggt
ggcgaggccgccgacggcgatgacgccgccgacggtgccggggacgattcgtcggcgccc
gacggtgacgaatcgaatgccgaggacggcgacactcccgagggcgccagtcgccgccgg
cgccggagacgtcgccgcaaggccggaagcggtgacgagggggatggcccgtcggatgac
gatccgccgaacactgttgtgcacgagcgcaagccgcgtgccgagcggggcgacgagatt
caggggatttccggttccacccgcctagaggccaagcgtcagcgccgccgcgacggccgc
gacgccggacggcgccggcccccgatcctgaccgaggccgagttcctggcccggcgcgag
gccgtcgaccgggtgatggtggtgcgggacaagacccgttccgagcccccgcacgagggc
gcccgctatacgcagatcgctgttctcgaggacggtgtgctcgtcgagcacttcgtgacg
tcggcggcctccgcgtcgctggtgggcaacatctacctcggcgttgtacagaacgtgctg
ccgtccatggaggcggcgttcgtcgacatcggccgcggtcgcaacggtgtgttgtacgcc
ggtgaggtcaattgggacgccgccggtctcggcggctccaaccgcaagatcgagcaggcc
ctcaaatccggtgactacgtgctggttcaggtcagcaaggacccggtgggacacaagggc
gcacggctcaccacccagatctcgctggcgggtcgctacctcgtgtacgtgccaggtgcg
tcgtcaaccggtatcagccgcaagttgcctgataccgaacgtcagcgcctcaaggagatc
ctgcgggacatcgtgccggcggacgccggtgtcatcatccgcaccgcctcggagggtgtg
cgggaagaggacattcgcgccgatgtgcagcggttgcaggagcagtggcagggcatcgaa
cagagtgccacggacctcacctccaaagcgtccggcgctgccgtggcgctgtatgaagaa
cccgacgtgctggtcaaggtggttcgtgacctgttcaacgaggacttctccaagctcatc
atcgagggtgacgccgcgtgggacaccatcgatgactatgtgaaaacggttgcccccgat
cttctttcgcggattgagcggtacgagggtggcgagggtccggacgtgttcacggtgcac
cgcatcgacgagcagctggccaaggcgctggatcgcaaggtgtggctgccctcgggtgga
accctcgtgatcgatcgcaccgaggcaatgacggttgtcgacgtcaacaccgggaagttc
accggagccggcggcaacctggaagaaaccgtcacccgcaacaacctggaagccgccgag
gagatcgtgcggcaactgcgtctgcgcgatgtcggcggcatcgtggtcatcgatttcatc
gacatggtgctcgaatccaaccgcgacttggtgctgcggcgtctcaccgaggcgctgggc
cgcgaccgcacccgtcaccaggtgtccgaggtgacgtcgctggggttggtgcagctgacc
cgcaagaagctgggcaccgggttgatcgaggcattctcgtccacctgcacgcactgcgcg
ggcaggggaatcgtgctgcatgtcgaccccgtcgacaatgcgagcaacgcgtcctccccg
gctaagaaggccgaaaccggacgccgggccaaacggtcccgcaagggcaagaccgacgat
gtggtggttgcacgcacaccctcgcacccgcagggcgagcatccgatgttcaaggcgatg
gcggcggccaatggccaccacgaggatgacgaagacgcggacgtgaacgaggatgcgctg
gacgaggacgcgaccgacgaggtcgaggagattgtcgagaccgtcgaaagcgctccgggc
ccgcaggcccccgaggctgaaacggaggccacgccgaccgacagcgaggccgccgcggaa
cccgtcgtcgaaagcacgcctgagggcattgttcccgagcctgaggccgctaccgagccg
gccacacccgaaccagctgctgagacgcccaccaggccccggcgcaggcgttccgcggcg
cgggccgcggggcccccggtagagcactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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