KEGG   Mariprofundus aestuarium: Ga0123461_0476
Entry
Ga0123461_0476    CDS       T05212                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
maes  Mariprofundus aestuarium
Pathway
maes03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:maes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ga0123461_0476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:maes03021]
    Ga0123461_0476
   03019 Messenger RNA biogenesis [BR:maes03019]
    Ga0123461_0476
Transcription machinery [BR:maes03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Ga0123461_0476
Messenger RNA biogenesis [BR:maes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Ga0123461_0476
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA NACHT AAA_22 AT_hook
Other DBs
NCBI-ProteinID: ATX78913
UniProt: A0A2K8KVW3
Position
457848..459692
AA seq 614 aa
MSNEIEAPQEVKTSEVKPSEEAPRRRGRPRKVVVDDAAETKATESKPVKPKAKRTKAEVT
PAKVEPKTAKAEAAPAEAESGAEEKPRRRGRPSKGEVKAEEVEVKAETKPANVEAKIEQE
PSSNNEEMNAADNQEQGKRSRWRNKPERNNGPDRNNSNRPDRGNKPERGNKPDRNPKRAR
RDDSEEKISDEMEGVTLNLKEISAKSPTELLELADQYDIDNAAGMRKQEQVSAILRAHGL
RSGTIYSEGVLEILPDGFGFLRSPDANYLSGPDDVYVSTHQIRRYFLRKGDTVAGEIRSP
RRGEKYFALKTVDTTNGQSPEQARTKVLFDNLTPLYPDERLHMEIEDPTNKDITGRIIDI
VSPIGKGQRALLVAPPRTGKTVMMQSIAHSIAANHPEVELIVLLIDERPEEVTDMKRSVK
GEVVSSTFDEPAQRHVQVSEMVIEKAKRLVETGKDVVILLDSITRLARAYNTVVPSSGKI
LTGGVDANALHRPKRFFGAARNIEGGGSLTIIATALVETGSKMDEVIFEEFKGTGNMEIK
LERKLTDKRIFPSIDIAPSGTRKEELLTPREDLQKVWILRKILSPMGSIDAMEFLLDKLG
TTKSNAEFFSRMNQ
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgtctaacgaaatcgaagcaccgcaggaagtgaagacttctgaggtaaaaccttctgaa
gaggcaccgcgccgtcgaggccggccgcgtaaagttgtggttgatgatgctgctgagacg
aaagctactgaatccaagcctgtaaaacctaaggctaagcgaaccaaggctgaagtgaca
cctgctaaagtcgaacctaagacagccaaagcagaagctgcccctgctgaggcagagtca
ggtgctgaagagaaaccacgtcgccgtggccggccgagcaagggtgaagtgaaggccgaa
gaggttgaagtgaaggcggagactaagccagccaacgttgaggctaagattgagcaagag
ccatccagtaacaacgaagagatgaacgcggcagataaccaggagcagggtaagcgcagc
cgctggcgcaataaacccgagcgcaacaacggccctgatcgcaataatagtaataggccc
gatcgcggtaataaacccgaacgcggcaacaagcctgatcgcaaccctaaacgtgctcgc
cgggatgattctgaagagaagatttccgatgagatggaaggagtcacgctgaatctgaaa
gagatttcggccaaatcaccaactgagctgctggagctggccgatcagtatgatattgat
aacgccgctggcatgcgcaaacaggagcaggtttctgcgattctgcgcgctcatggtctg
cgtagtggaaccatctacagtgagggtgttctggagatcctgccggacggattcggtttc
ctacgctcccctgatgccaactacctttcgggtccggacgatgtgtatgtttcaacccat
cagattcgccgctatttcctgcgaaagggtgataccgtagccggtgaaattcgttcccct
cgccgtggcgagaaatattttgccctgaaaacagtcgataccaccaatggtcagtcgcct
gagcaggcacgaaccaaggttctctttgataaccttacccctctttacccggatgaacgc
cttcatatggagatcgaggatccgacgaacaaggatattaccggtcgtattatcgatata
gtatctccgatcggtaaagggcagcgcgccctgctggtagcaccgccacgtaccggtaaa
acagtgatgatgcagtcgattgctcactctattgccgctaatcatccggaagttgaactg
atcgtcctgctgattgatgagcgtcctgaagaggtgaccgatatgaagcgctcggtgaag
ggtgaggttgtatcctccaccttcgatgagccggctcagcgtcatgttcaggtttccgag
atggtcattgagaaggccaaacgtctggttgaaacaggcaaggatgtggtgatcctgctc
gattctattacccgtctggcgcgtgcttataacacggtggttccctcctcaggtaagatt
cttaccggtggtgtggatgccaatgcactgcacaggccaaaacgtttctttggcgctgcc
cgaaatattgagggtggcggttccctgaccattattgccactgccctggttgagaccggc
tccaagatggatgaggtgatctttgaggagttcaaaggcaccggcaacatggagatcaag
ctggaacgtaaattgaccgataagcgcattttcccatcgattgatattgcaccatcaggc
acccgtaaagaggagcttcttacacctcgcgaagatcttcagaaggtttggattctgcgc
aagatcctctcccctatggggtcaattgatgcgatggagttcctgctggataaactcggc
acaaccaagagcaatgctgagttcttcagtcgaatgaatcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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