KEGG   Magnetospirillum sp. XM-1: XM1_1146
Entry
XM1_1146          CDS       T04231                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
magx  Magnetospirillum sp. XM-1
Pathway
magx00300  Lysine biosynthesis
magx00470  D-Amino acid metabolism
magx01100  Metabolic pathways
magx01110  Biosynthesis of secondary metabolites
magx01120  Microbial metabolism in diverse environments
magx01230  Biosynthesis of amino acids
Module
magx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:magx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    XM1_1146 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    XM1_1146 (dapF)
Enzymes [BR:magx01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     XM1_1146 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase DHODB_Fe-S_bind
Other DBs
NCBI-ProteinID: CUW38215
UniProt: A0A0U5HXU2
Position
I:1115017..1115871
AA seq 284 aa
MSDRAWPFLKMHGLGNDFVVLDARARAFDLTPARVRAIASRGTGVGCDQLVVLAPPSGNT
ADATMLIYNADGSEVAACGNASRCVAWLLMKETGLDKVVFETKAGLLDAESRGPFQVAVD
MGPARLDWREIPVAEAVDTLHLGIAAGPLADPVGVSMGNPHAVFFVDDAESVDLAALGRG
LEHHPMFPERANIEVAQVLTPPDAEIGRIRMRVWERGAGITMACGTGACATLVAAARRGL
SPRKAEITLDGGQLTIEWLKDGHVLMTGPVAVAFAGTLDSSLLP
NT seq 855 nt   +upstreamnt  +downstreamnt
atgagcgatagagcctggccctttctgaagatgcacggcctggggaacgacttcgtcgtc
ctcgacgcccgcgcgcgcgccttcgatctgacgcccgcccgagtgcgcgccatcgcgtcg
cgcggcaccggggtgggctgcgaccagttggtggtgctggcgcctccttcgggcaacacc
gccgacgctaccatgctgatctacaacgccgacggttccgaggtggcggcctgcggcaac
gcgtcgcgctgcgtcgcctggctcttgatgaaggaaaccggcctcgacaaggtggtgttc
gagaccaaggcgggattgctcgacgccgaatcgcgcggccccttccaggtggcggtggac
atgggaccggcgcgcctggactggcgggaaattccggtggccgaggcggtggacaccctg
catctgggcatcgccgccggaccgctggccgatccggtgggcgtcagcatgggcaacccc
cacgcggtgttcttcgtggacgacgcggaaagcgtcgacctcgccgccttgggccgtggc
ctcgagcatcatcccatgttccccgagcgcgccaatatcgaggtggcccaggtcctcacc
ccgcccgacgccgagatcgggcgcatccgcatgcgggtgtgggagcggggcgccggcatc
accatggcctgcggcaccggggcctgtgccacgctggtggcggcggcgcggcggggctta
agcccccgcaaggccgagatcaccctggacggcggccagctcaccatcgagtggctgaag
gacggccacgtgctgatgaccgggccggtggcggtggcctttgccgggacgctggattcc
agcctgcttccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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