KEGG   Methylotuvimicrobium alcaliphilum: MEALZ_2406
Entry
MEALZ_2406        CDS       T01649                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
mah  Methylotuvimicrobium alcaliphilum
Pathway
mah03030  DNA replication
mah03430  Mismatch repair
mah03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MEALZ_2406 (dnaX)
   03430 Mismatch repair
    MEALZ_2406 (dnaX)
   03440 Homologous recombination
    MEALZ_2406 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mah03032]
    MEALZ_2406 (dnaX)
   03400 DNA repair and recombination proteins [BR:mah03400]
    MEALZ_2406 (dnaX)
Enzymes [BR:mah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MEALZ_2406 (dnaX)
DNA replication proteins [BR:mah03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MEALZ_2406 (dnaX)
DNA repair and recombination proteins [BR:mah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MEALZ_2406 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_5 AAA_16 AAA_14 AAA_18 ResIII AAA_30 nSTAND3 AAA_7 AAA_19 PIF1 Rad17 AAA_28 Mg_chelatase TsaE AAA_assoc_2 DUF5435 T2SSE SKI Herpes_Helicase
Other DBs
NCBI-ProteinID: CCE24087
UniProt: G4SVM8
Position
complement(2750810..2752438)
AA seq 542 aa
MTYQVLARKWRPHNFSEIVGQEHVVKSLINALQHDRLHHAYLFTGTRGVGKTTIARILAK
AINCENLQGHNPCGECNVCIQLDQGRFLDLIEVDAASRTKVEDTRDLLENAQYAPNSGRY
KVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPHKIPVTVLSRCLQFNLKRMLP
EQVFKQMEFILQQEGIESESAALRLLARAADGSMRDGLSLLDQAIVYGNGKVGLDDVCLM
LGTIAQHPVNDLLTALAAANAQEMLKVIGEMADLTPDFGDVLQQILQALHRIALYQAVPA
SIEHEFDGEMIVELAKLLSPEDIQLYYQIALIGRRDLDLAPDPKSGFEMVMLRMLAFKPS
TLQTPTSSSPQPVNSEPAKNTTNKSVASLKGAEHAIKPADAFEPGPSGSDTSQWADMIAA
MRIGGMTRELANNCVLQSIDDKVCTLLLDPGHKQLSGARTVEKLQKSLQDFCGKPIKLNI
ITEKAEVDTPAVQLQKDREDLQRSAVEAIENDETVHALKERFDARILPGTIEPVAQQDRR
NT
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgacttaccaggttctcgccagaaaatggcggcctcataatttctccgaaattgttggt
caagaacatgttgtcaaatcgctgatcaatgcattgcaacatgatcgtctacatcatgcc
tatttattcaccggtacgcgcggcgtgggtaaaaccacgatagcccgaattctcgccaag
gccatcaactgcgaaaaccttcaaggtcataatccttgcggcgaatgtaatgtctgcatt
caactcgaccagggccgctttctggatttaatcgaagtcgatgccgcttcccgaaccaaa
gtcgaagatacccgagatttgctcgaaaatgcgcaatatgcgccgaatagcggtcgttac
aaagtctatctgatcgacgaagtccatatgctgtcggggcatagctttaacgccttattg
aaaacgctcgaagaacccccgccgcacgtcaagtttttgctggctacgaccgatccccat
aaaattccggtaaccgtactatcccgttgcctgcagttcaatttgaaaagaatgctgccg
gagcaggtatttaagcaaatggaatttattcttcagcaagaaggcatcgagtcggaatcg
gcggcgctgagattgcttgcgcgcgcggctgatgggagtatgcgtgacggcttgagtttg
ctcgaccaagcgattgtttacggcaacggtaaggttggcctcgacgatgtgtgtttgatg
cttggaaccattgcacaacatcccgtcaatgatttgctgaccgccttggcggctgccaat
gcgcaggaaatgcttaaagtgatcggcgaaatggccgatttgactcccgacttcggcgat
gtattgcaacaaatcttgcaagcattgcacaggattgcgctctatcaagcggtgcctgcc
tcgatcgaacacgagttcgatggagagatgattgtcgagttggctaaactgctcagcccc
gaggatattcagctttattatcaaattgcattgatcggccggcgcgatttagatttggct
cccgatcctaaaagcggttttgaaatggtcatgttgaggatgcttgcctttaagccttcc
acgttacagacgccaacttcgtcgtccccgcaaccggtaaatagcgagccggcaaaaaac
actacaaataaatccgttgcatcgcttaagggtgccgaacacgctataaaacccgcggac
gcttttgagcccggtccgtccggatcggatacaagccaatgggccgacatgatagccgcg
atgaggatcggtggtatgacccgcgaattggcgaataattgtgtgctgcaaagtattgat
gataaagtctgtacattgctgctcgacccggggcataagcaattaagcggcgcccgaacg
gtagagaaattacaaaaatcgttgcaagacttttgcggtaaaccgataaagctgaacatt
attaccgagaaagccgaagtcgatacgcccgcagtgcaattgcaaaaggaccgagaagat
ttacagcgttcggcggtcgaggctatcgaaaacgacgagacggtacacgcccttaaagaa
cgattcgacgccagaattttgcccggaacgatagaaccggttgctcaacaagacaggaga
aacacatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (77)   

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