KEGG   Marinobacter nauticus VT8: Maqu_0266
Entry
Maqu_0266         CDS       T00454                                 
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
maq  Marinobacter nauticus VT8
Pathway
maq03030  DNA replication
maq03430  Mismatch repair
maq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:maq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Maqu_0266
   03430 Mismatch repair
    Maqu_0266
   03440 Homologous recombination
    Maqu_0266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maq03032]
    Maqu_0266
   03400 DNA repair and recombination proteins [BR:maq03400]
    Maqu_0266
Enzymes [BR:maq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Maqu_0266
DNA replication proteins [BR:maq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Maqu_0266
DNA repair and recombination proteins [BR:maq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Maqu_0266
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: ABM17372
UniProt: A1TXA3
Position
complement(309046..309768)
AA seq 240 aa
MSSVIKSGNSKQNWPENYRKGAEQAKDARIRAFYEAGCPSPDTPVRDVPLVALDFETTGL
EADQHSIVSIGLVPFTLTGIQLGQCWHQVVRPRLPLHKTSVTIHGITHSEIENAPDLEDV
LDPLFEHLNGRIPVVHYRNIERPFLNTALQWRLNEQLRFPVIDTMAIEAHLHPNRNPSRW
QQLMGKKPISIRLADSRLRYGLPHYASHNALIDAIATAELLQAQVLHHFSPETPIGDLWV
NT seq 723 nt   +upstreamnt  +downstreamnt
atgtctagcgtgatcaaaagcggcaacagcaagcagaattggccagagaactaccgcaaa
ggcgccgaacaggcaaaagacgccagaatccgcgccttctacgaagccggctgccccagt
ccggacacgcctgtccgggacgtccccttagtggccctggacttcgaaaccactggcctg
gaagccgaccagcattccatcgtcagcatcggcctggtgccctttaccctgacaggtatc
cagctcggccaatgctggcaccaggtggttcgacccagactgcccctgcacaaaacctct
gtgaccatccacggcattacccacagcgaaatcgaaaacgccccggacctggaagacgta
ctcgacccgctgttcgaacacctcaacggccgaatccccgtggtgcactaccgcaacatc
gaacgcccgttcctgaacaccgccctgcaatggcgcctgaacgaacaactccgcttcccg
gtcatcgacaccatggccatcgaagcgcacctgcacccaaaccgcaaccccagccgctgg
cagcaactgatgggcaaaaagccgatctccatccgcctggccgacagccggctccgctac
ggcctgccccactatgcctcccataacgccctgatcgacgccatcgccacagccgagctg
cttcaggcccaggtactgcaccacttcagcccggagacccccattggcgatctgtgggtg
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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