KEGG T04633: LN42

Marinitoga sp. 1137: LN42_01180

Entry

LN42_01180        CDS       T04633

Name

(GenBank) ATP-dependent DNA helicase RecG

K03655

ATP-dependent DNA helicase RecG [EC:5.6.2.4]

Organism

marn Marinitoga sp. 1137

Pathway

marn03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:marn00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LN42_01180
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:marn03400]
    LN42_01180
Enzymes [BR:marn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LN42_01180
DNA repair and recombination proteins [BR:marn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LN42_01180

SSDB

Motif

Pfam:

RecG_wedge RecG_N Helicase_C DEAD RecG_dom3_C ResIII tRNA_anti-codon HHH_5 Innexin tRNA_anti_2

Other DBs

NCBI-ProteinID:

APT75163

Position

220728..223070

AA seq 780 aa
MNIEDFFNGLEAKLKDALKEKLKWEYLFKELYKYSANYINIIEQEKGLKEKIGSFLGYYK
PIANLSDERRIKRALNGLELIEKLKYEYLIDSPEKPYKDMPLATDIKFIKGVGNKRAKIL
REFGINSIEDTFYFFPRDYEDRREIKRIIDCYHGQNCLVVGNIVNFEEKNIGSLRILSYA
LEDKDGSVLILTWFNQEYIKKFIQVGLKVAAYGTVEVEFGRKTIKNPDFQIITSEQEVQT
GILPVYPLKRGIYQNNMRNIFSETIPYVNYKEEFIPEEIKNKYKLISLSRRIKGIHFPKS
FFHYEKAKEALKYEEIFLFEFSVLMKKRLIKEKIGISKKNEGKLIEEFKKILSFKLTNAQ
NKVFNEIRKDMDSKEPMNRLLQGDVGSGKTVVSEMALLYNYESGFQGAVMVPTSVLAKQQ
FLKIKKHMENFGINVELLLGETKNSEKKIIKEKLKNGEIDILIGTHALIQEDVEFKNLGL
VVIDEQHRFGVKQRLSLINKGVMPDILFMTATPIPRTLAMTLYGDLDVSIIDEMPSGRKK
VKTVYATEEKINEIYKFIEDELKQKHQVFFIYPLIEESEAIDLKAATEMYEVLNERFKKY
GVELLHGKMKSQEKNDIMERFSKKEFLILVSTTVVEVGVDIPDATVIVIEHAERFGLSQL
HQLRGRVGRSNKQAYCFLVVSKKTASETRERLRKFAQTTNGFEVSEMDLQWRGPGKFFGT
EQHGLPDFKFPDILSNPELINTARKDANEILSKDPDLIKYPALREEIYKRYGKKLKMLEA

NT seq 2343 nt +upstreamnt +downstreamnt
atgaatatagaagacttttttaacggtctcgaagctaaattaaaagatgctttaaaagaa
aaactaaaatgggaatatttatttaaagagttatataaatattccgccaattatataaac
ataatagaacaggagaagggcctaaaagaaaaaataggctcttttcttggttattataaa
cctatagctaatctttcagatgaaaggcgtataaaaagagctttaaatggtttagaacta
atagaaaaattgaaatatgaatatctaattgattcaccagaaaaaccatataaagatatg
ccattagctacagatattaaatttatcaaaggtgtcggcaataaacgtgcaaaaatatta
agagaatttggtattaattcaattgaagatacattttattttttcccgagagattatgaa
gatagaagagaaattaaacgtattattgattgttatcatggtcaaaattgtcttgttgtt
ggtaatatagtaaattttgaagaaaaaaatataggaagtttaagaatattatcatatgct
cttgaagataaagatgggagtgttttaattcttacatggtttaatcaggaatatataaaa
aaatttattcaagttggattaaaggttgcagcctatggaacagttgaagtggagtttggc
aggaaaaccattaaaaatcctgattttcagataataacttctgaacaagaagttcaaact
ggaattcttccagtatatcctttaaaaagaggtatataccaaaacaatatgagaaacatt
ttttcagaaacaattccctatgtaaattataaagaagaatttattcctgaagaaatcaaa
aataaatataaattaataagcttatccaggcgaataaaagggatacattttccaaagagt
ttttttcattatgaaaaagccaaagaagctttaaaatatgaagagatttttttatttgaa
ttttcagtattaatgaaaaaaagattaattaaagaaaaaataggtatatctaagaaaaat
gaagggaaattaattgaagaatttaaaaagatattatcttttaaattgactaatgctcaa
aataaggtttttaatgaaataagaaaagatatggattccaaagaacctatgaacagacta
ttacaaggagatgttggttcaggaaaaactgtagtttcagaaatggcattattatacaat
tatgaaagtggttttcagggagcagtgatggtaccaacctctgtactcgctaaacaacaa
tttttaaaaattaaaaaacatatggagaattttgggattaacgtggaattattattgggt
gaaacaaaaaattctgagaaaaaaattattaaagaaaaattaaaaaatggtgaaatagat
attttgataggaacacatgcattaattcaggaagatgtagaatttaaaaaccttggtctt
gttgtaattgacgaacaacatcgttttggagtaaaacagcgtttaagcttaataaataaa
ggggtaatgcctgatatcttatttatgacagctaccccaattccccgaacgctcgccatg
acattgtatggagatcttgatgtttcaataattgatgaaatgccatctggaaggaagaaa
gttaaaacagtttatgcaacagaagaaaaaataaatgaaatatataaatttatagaagat
gaattaaaacaaaaacaccaggttttctttatatatccgctaattgaagaatctgaagca
atagatttaaaagccgcaacggaaatgtatgaagtattaaatgaaagatttaaaaaatat
ggtgttgaactattacatggtaaaatgaaatcacaggaaaaaaacgatattatggaacga
ttttccaaaaaagaattcttaatccttgtttctacaacagttgtggaagttggtgttgat
attccagatgctaccgtaattgttatagaacatgcagaacgttttggtctatcacaattg
catcaattaagaggaagagttggaagaagtaataagcaggcttactgtttccttgttgtt
agcaaaaaaacagcttctgaaacacgagaacgcttaagaaaatttgctcaaacaacaaat
ggatttgaagtttcagaaatggatctgcaatggagagggcctggaaaattctttggcact
gagcagcatggattaccagattttaaatttcctgatatattaagcaatccagaacttata
aacacagcaagaaaagatgctaatgaaatattgtccaaagatcccgatttaataaaatat
cctgcattaagagaagaaatatataaacgatatgggaaaaaattaaaaatgttagaagcg
tag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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