KEGG   Marinobacterium aestuarii: A8C75_18600
Entry
A8C75_18600       CDS       T04398                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
mars  Marinobacterium aestuarii
Pathway
mars03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mars00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A8C75_18600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mars03019]
    A8C75_18600
Enzymes [BR:mars01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A8C75_18600
Messenger RNA biogenesis [BR:mars03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A8C75_18600
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 P-loop_SecA CMS1 AAA_30 MucB_RseB
Other DBs
NCBI-ProteinID: ANG64283
UniProt: A0A1A9F3G8
Position
4242813..4244120
AA seq 435 aa
MSTFNALGLIDPLQQALAELEYRSPTAVQTQAIPAILSGADLVAEAQTGTGKTAAFALPI
LQHLSAEPASDEIRPIRALVLVPTRELALQVAESMDAYGRYLSLRTIALYGGSRVESQID
RLKRGADILVATPGRLLDLMHQGIFDLRQLQMLVLDEADRMLDLGFIEDIRQLRKKMPRH
CQTLLFSATLSEAIEELVPEFLQKPTWVRVTKRNSTAKTVLQFAYAVDQSDKCDVLSYLI
QGGKWAQVLVFTRTKKRADMVADYLQAEGIDARALHGDKPQRERVGVLRDFSQGKVRILV
ATDVAARGLDIDSLPRVVNYDLPNVPEAYVHRIGRTGRAGGKGQAISLVSPDEKRYLVAI
EALIGRPLSIKPVPYQGSNAADDNHSLRASKNSRLRAKMKPVPVKAAPAPMPEVDDTNTR
AVRPSLLSASKKRKK
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgagtacgtttaacgccctcggccttattgatcccctgcagcaggcactggcggagctc
gaataccgcagccccaccgccgtgcagacccaggcaattcccgccattctgagcggtgcc
gacctggtggccgaagcccagaccggtaccggtaaaaccgccgccttcgccctgccaata
ctgcagcacctgagtgccgagcccgcctctgatgagattcgtccgatacgcgccctggtg
ctggtccccaccagggaactggcgctgcaggttgccgaaagcatggacgcctacggccgt
tacctgagcctgcgcaccatcgcactctatggcggcagccgggtggaaagccagatcgac
cggctgaagcgcggcgccgatatactggtggcaacgccgggtcgcctgctggatctgatg
caccagggcatcttcgatctgcgccagctgcagatgctggtgctggacgaagccgaccgc
atgctggatctgggctttattgaagatattcgccagctgcgcaaaaaaatgccgcgccac
tgtcagaccctgctgttctcggccaccctgtccgaggccatcgaagagctggtgcccgaa
tttctgcaaaagcctacctgggtgcgggtcaccaagcgcaactccaccgccaaaaccgtg
ctgcagttcgcctatgcggtggatcagtccgacaaatgcgacgtgctcagctatctgatt
cagggtggaaaatgggcccaggtactggtgttcacccgcaccaagaagcgcgccgacatg
gtggccgactatctgcaggccgagggtattgatgcccgcgcactgcatggcgacaagcca
cagcgcgagcgcgtcggcgtactgcgcgacttcagccagggcaaggtccgcattctggtc
gccacagacgtggccgcccgcggcctggatatcgactcactgccacgggtcgtcaattac
gacctgcccaatgtccccgaagcctatgttcatcgtatcggccgcaccggacgtgccggt
ggcaagggccaggcgatatctctggtatccccggatgaaaagcgctacctggtcgccatc
gaagccctgatcggtcgcccgctgtcgatcaagcctgtgccctatcagggcagcaatgcc
gccgacgataaccacagccttcgcgcctcgaaaaactcacgcctgcgcgccaagatgaaa
ccggtaccggttaaagcagccccggcacccatgcccgaagtcgacgacaccaacacccgc
gcggtgcggccgtccttgctgtcagcgtccaaaaagcgcaagaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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