KEGG   Massilia violaceinigra: CR152_07510
Entry
CR152_07510       CDS       T05157                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mass  Massilia violaceinigra
Pathway
mass03030  DNA replication
mass03410  Base excision repair
mass03420  Nucleotide excision repair
mass03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mass00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CR152_07510
   03410 Base excision repair
    CR152_07510
   03420 Nucleotide excision repair
    CR152_07510
   03440 Homologous recombination
    CR152_07510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mass03032]
    CR152_07510
   03400 DNA repair and recombination proteins [BR:mass03400]
    CR152_07510
Enzymes [BR:mass01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CR152_07510
DNA replication proteins [BR:mass03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CR152_07510
DNA repair and recombination proteins [BR:mass03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CR152_07510
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CR152_07510
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: ATQ78768
UniProt: A0A2D2DUW3
Position
1676850..1679594
AA seq 914 aa
MQNTLLLVDGSSYLYRAFHALPDLRSPDGHPTGAMHGMVNMLRRLRQDYPAAYIACVFDA
KGKTFRDDMYPEYKATRASMPDDLRLQIEPIHEVVRHMGWPILMVDGVEADDVIGTLSVQ
ASSLGMNTVVSTGDKDLAQLVNDKVTLINTMSNEKLDEAGVMAKFGVPPNRIIDYLTLIG
DTVDNIPGVAKCGPKTALKWLALHDSLDGVIANAASIGGAVGENLRQALDWLPQGRALIT
VKTDCDLAAHMVSIADTLVAQPENKEGLKAFFERYGFKTLLREVIQRDDEGAPRALLNSP
EGDLFPGAVVPVMRGEYDTVVTEADLERWLALVDAAELTSVDTETTSLDPMTAQMVGISL
SVEAGKGAYIPLAHRYAGVPEQLDREAVLARMKPWLEDASKPKVGQNLKYDSHIFANHGV
TLRGIMHDTLLQSYVFESHKPHDMDSMALRHLGYTTIPFTEVCGKGAGQICFDQVELGRA
TEYAAEDSDITLRLHQAMKGHVESDEKLNFIYRQIELPTSVVLHKIERNGVLIDAELLNV
QSGELGARIMELEQKAYELAGGPFNLDSPKQIGEIFFGKLQLPVIKKTPSGAPSTDEEVL
QKLAEDFPLPKILLEYRGMSKLKSTYTDKLPKMVNRATGRVHTNYAQAVAVTGRLSSNEP
NLQNIPIRTAEGRRIREAFIAGPGNVIVSADYSQIELRIMAHISEDAAMLRAFAEGEDIH
RATAAEIFGVPPAEVQGEQRRYAKVINFGLIYGMSAFGLAANLGIERSAAQNYIDKYFAR
FSGVRQYMEDTRMQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTAAD
LIKLAMIAVQNWLETDKLGTRMIMQVHDELVLEVPQAELELVKARLPQLMAGVAALKVPL
LAEVGIGKNWDEAH
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgcaaaataccctgctgttagtcgacggttccagttatctttaccgtgcttttcacgcc
ctgcctgacctgcgcagccccgacggccatcccaccggcgccatgcacggcatggtcaat
atgctgcgtcgcctgcgccaggattatccggccgcttacatcgcttgcgtgttcgatgcc
aagggcaagactttccgcgacgatatgtatccggaatacaaggccacgcgcgcgtccatg
ccggacgacctgcgcctgcagatcgagccgatccatgaagtggtgcgccacatgggctgg
ccgatcctgatggtcgatggcgtcgaggccgacgatgtcatcggcacgctgtcggtccag
gcgtcaagcctgggcatgaacaccgtcgtttccaccggcgacaaggacctggcccagctg
gtcaacgacaaggtcaccctgattaacacgatgagcaacgagaagctcgacgaagccggc
gtgatggccaagttcggcgtgccgcccaaccgcatcatcgattacctcacgctgatcggc
gacacggtcgacaatatcccgggcgtggccaagtgcggcccgaaaaccgccctgaagtgg
ctggcgctgcacgacagcctcgatggcgtgatcgccaacgcggccagcatcggcggcgcg
gtcggcgagaatctgcgccaggcgctcgactggctgccgcagggccgcgccctgatcacc
gtcaagaccgattgcgacctggccgcgcacatggtgtcgatcgccgacaccctggtagcc
cagccggaaaacaaggaaggcctgaaagccttcttcgagcgttacggcttcaagaccctg
ctgcgcgaagtgatccagcgcgacgacgaaggcgccccgcgcgccctgctcaattccccc
gagggcgacctgttccccggcgcggtggtgcctgtcatgcgcggcgagtacgacaccgtg
gtcaccgaggccgacctggaacgctggctggcgctggtcgatgccgccgaactgacctcg
gtcgataccgaaaccacctcgctcgacccgatgacggcccagatggtcggcatttcgctg
tcggtcgaagcaggcaagggcgcttacatcccgctggcgcaccgctacgccggcgtgccc
gaacagctcgaccgcgaggcggtcctggcgcgcatgaagccctggctggaagacgcgtcc
aaaccgaaggtcggccagaacctcaagtacgacagccatattttcgccaaccacggcgtg
accctgcgcggcatcatgcacgacaccttgctgcaatcgtacgtgttcgagtcgcacaag
ccgcacgacatggacagcatggccctgcgccacctgggctacaccacgattccgtttacc
gaggtatgcggcaagggcgccggccagatctgcttcgaccaggtcgaactggggcgcgcc
accgaatacgcggccgaggattccgacatcaccctgcgcctgcaccaggccatgaagggc
catgtcgagagcgacgagaagctcaatttcatctaccgccagatcgagctgccgacctcc
gtggtgctgcacaagatcgaacgcaacggggtgctgatcgacgccgagctgttgaacgtg
cagtcgggcgaactcggtgcgcgcatcatggagctcgagcaaaaagcctacgagctggcc
ggcgggccgttcaacctcgattcgcccaagcagatcggcgagatcttcttcggcaagctg
cagctgccggtgattaaaaagaccccgagcggggcgccgtcgaccgacgaggaagtgctg
caaaagctggccgaggacttcccgctgccgaaaatcctgctcgagtaccgcggcatgtcc
aagctcaagtcgacctacaccgacaagctgcccaagatggtcaaccgcgcgaccggccgc
gtgcacaccaactacgcgcaggcggtcgcggtgacggggcgcctgtcgtcgaacgaaccg
aatctgcagaacatcccgatccgcaccgccgaagggcgccgcatccgcgaagccttcatc
gccgggccgggcaacgtgatcgtgtcggccgactattcgcagatcgagctgcgcatcatg
gcccatatttcggaagacgcggccatgctgcgcgcctttgccgagggcgaggatattcac
cgcgccaccgccgccgaaatcttcggcgtgcctccggccgaggtgcagggcgagcagcgg
cgctacgcgaaggtgatcaatttcggcctgatttacggcatgagcgccttcgggctggcc
gccaacctgggcatcgaacgctcggcggcgcaaaactatatcgacaagtacttcgcgcgc
ttttccggcgtgcgccagtatatggaagacacgcgcatgcaggccaaggcgcgcggctac
gtcgaaaccgtgttcggacggcgcctgtggctgccggagattaattcgccgaacgggccg
cgccgccagggtgcggaacgggccgcgatcaacgcgccgatgcagggcacggcggcggac
ctgatcaagctggccatgatcgcggtgcagaactggctggagacggacaagctgggcacg
cgcatgatcatgcaggtgcacgatgaacttgtactggaagtgccgcaggcggaactggag
ctggtcaaggccaggctgccgcaattgatggcgggcgtggcggccctgaaggtgcccctg
ctggctgaagtgggtattggcaaaaactgggacgaagcacactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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