KEGG   Massilia violaceinigra: CR152_12580
Entry
CR152_12580       CDS       T05157                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
mass  Massilia violaceinigra
Pathway
mass00521  Streptomycin biosynthesis
mass00523  Polyketide sugar unit biosynthesis
mass00525  Acarbose and validamycin biosynthesis
mass00541  O-Antigen nucleotide sugar biosynthesis
mass01055  Biosynthesis of vancomycin group antibiotics
mass01100  Metabolic pathways
mass01110  Biosynthesis of secondary metabolites
mass01250  Biosynthesis of nucleotide sugars
Module
mass_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:mass00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    CR152_12580 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CR152_12580 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CR152_12580 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CR152_12580 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CR152_12580 (rfbB)
Enzymes [BR:mass01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CR152_12580 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 NAD_binding_4
Other DBs
NCBI-ProteinID: ATQ75258
UniProt: A0A2D2DJV1
Position
2772944..2774008
AA seq 354 aa
MIFVTGGAGFIGSNFILDWLALGDEPVLNLDKLTYAGNLNNLARLKDDPRHLFVQGNIGN
RALVAQLLERHRPRALVHFAAESHVDRSIDAPGDFIATNINGTFALLEAARAYWQDLASA
QKSAFRFLHVSTDEVYGTLGPGDPAFTERTAYAPNSPYAASKAASDHLVRACHHTYGLPT
LTSNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQQVRDWLYVGDHCAALRRILAS
GRPGEVYNVGGCNEMKNIDVIHTLCDLLDAALPRAASAASYRSQIAYVADRPGHDRRYAV
DAGKLRRELGWVPAETFGSGIANTVRWYLEHRQWAADIASGAYRNGLADAGAAA
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgatttttgtaaccggtggtgccggttttatcggatccaatttcatcctcgactggctc
gcgcttggcgacgagccggtattgaatctcgataagctgacgtatgcaggcaatctgaat
aatctcgcgcggctcaaggacgacccgcgccacctgttcgtgcagggcaatatcggcaac
cgcgcgctggtggcgcagctgctggagcggcaccgcccgcgcgcgctggtccatttcgcc
gccgagagccatgtggaccgctcgatcgacgccccgggggacttcatcgccaccaatatc
aatggcacctttgcgctgctcgaggcggcgcgcgcgtattggcaggatctggccagcgcg
caaaaaagcgcgtttcgcttcctgcacgtgtcgaccgatgaagtgtatggcaccctcggt
ccgggcgacccggcgtttaccgagcgcaccgcgtatgcgccaaacagcccgtatgcggct
tccaaggcggcgtcggaccatctggtgcgggcctgccatcacacctacggcttgccgacc
ctgaccagcaattgctcgaacaactatggtccctaccagttccccgaaaagctgattccg
ctgatgattgccaatgcgctggccggaaagccgctgcccgtgtacggcgacgggcagcag
gtgcgcgactggctgtatgtgggcgaccattgtgcggcgctgcgccgcattctggcgtcc
gggcggccgggcgaggtgtataacgtcggcggctgcaatgaaatgaaaaatatcgatgtg
atacacaccctgtgcgatctgctcgacgccgcgctgccgcgggcggccagcgcggctagt
tatcgcagccagatcgcgtatgtggcggaccgcccgggccacgaccggcgttatgcggtc
gatgccggcaagctgcggcgtgaattgggctgggtcccggccgagacgttcggcagcggg
atcgccaatacggtgcgctggtacctggagcaccgccaatgggcggccgatatcgcctcg
ggcgcttatcggaatgggctggcggatgcgggagcggcggcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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