KEGG   Pseudoduganella armeniaca: C9I28_21555
Entry
C9I28_21555       CDS       T05378                                 
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
  KO
K18138  multidrug efflux pump
Organism
masz  Pseudoduganella armeniaca
Pathway
masz01501  beta-Lactam resistance
masz01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:masz00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    C9I28_21555
   01503 Cationic antimicrobial peptide (CAMP) resistance
    C9I28_21555
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:masz02000]
    C9I28_21555
   01504 Antimicrobial resistance genes [BR:masz01504]
    C9I28_21555
Transporters [BR:masz02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   C9I28_21555
Antimicrobial resistance genes [BR:masz01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    C9I28_21555
SSDB
Motif
Pfam: ACR_tran SecD_SecF
Other DBs
NCBI-ProteinID: AVR97934
UniProt: A0A2R4CE73
Position
complement(4936357..4939503)
AA seq 1048 aa
MARFFIDRPIFAWVVAIVIMLAGVLAIMGLPIAQYPSIAPPSISISGSYPGASAKTVEDA
VTQVIEQKMKGIDGLRYMSSSSDSTGGISITLTFKSGTNPDIAQVQVQNKLQLATPLLPT
AVTQQGLVVSKATKNFLMVLGFVSEDGSMNNADLGDYVAANVVDPLSRVQGVGDVTLFGS
QYAMRIWLDPTKLQSFQLTPADVITAVQAQNAEVSAGELGGAPAVPGQQLNATVTAQSRL
QTAEQFGAILLKTMENGATVHLSDVAKMELGRENYNTVARFNGKPAAGIAIKLATGANAL
DTAEAVKQRIDEMSKLFPQGMKAVVAFDTTPFVKLSIEEVVKTLAEAIVLVFLVMYLFLQ
NFRATLIPTMAVPVVLLGTFAILSALGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
TEEGLSPKEATKKSMGQISGALVGIALVLSAVFVPMAFFGGSTGVIYRQFSITIVSAMVL
SVLVAMVFTPALCATFLKPVEKGHHMTNRGFFGWFNRNFEAGTNKYQGWVGNMIRRSGRS
MVVYAVLLAVLALVFLRLPTSFLPQEDQGVLFSQIQLPTGATQERTLKTIEKVEQHFLQN
EKGNVASMFAVAGFSFGGNGQNTGIAFVKLKDWSERHGAENRVDAIVGRAMGAFSQLRDA
MVFAFAPPAVLELGNASGFDLQLQDQGGVGHEALMAARNQLLGMASQNKALVGVRPNGQE
DTPQYKITVDQQKATALGLSVADVNKVLSVGWGSAYVNDFIDRGRVKKVFMQGQADARMV
PEDLNKWFVRNASGEMVPFSAFAHGEWSYASPRLERYNGLSSVNVQGSPAPGVSSGVAMA
EVEKMLAQLPPGIGYEWTGLSVEERESGSQTTSLYAISILIVFLCLAALYESWSVPFSVL
LVVPLGVIGTVLATWGLHLSNDVYFQVGLLTVVGLSAKNAILIVEFAKELQEAGRDLREA
TLEAVKLRLRPILMTSIAFGLGVLPLAVASGAGSGSQNAIGVGVLGGMLTATFLGIFFVP
VFFVLVRSWFASRAKPAPGADAILKEAH
NT seq 3147 nt   +upstreamnt  +downstreamnt
atggcaagatttttcattgaccggcccatcttcgcatgggtggtcgcgatcgtcatcatg
ctcgcgggcgtactcgcgatcatgggactgccgatcgcgcagtaccccagcatcgcgccg
ccatcgatctcgatcagcggctcgtatccaggcgcctcggccaagaccgtcgaggacgcg
gtgacccaggtcatcgagcagaagatgaagggcatcgacggcctgcgctatatgtcgtcg
tcgtccgactccaccggcggcatcagcatcacgctgacgttcaagagcggcaccaacccg
gacatcgcccaggtgcaggtgcagaacaagctgcagctggccacgccgctgctgccgacc
gccgtcacgcagcagggcctggtggtgtcgaaagccaccaagaacttcctgatggtgctg
ggcttcgtgtcggaagacggcagcatgaacaatgccgacctgggcgactacgtggcggcc
aacgtggtcgatccgttgtcgcgcgtgcagggcgtgggcgacgtcaccttgttcggttcc
cagtacgcgatgcgcatctggctcgacccgaccaagctgcaaagcttccagctgacgccg
gcggacgtgatcacggccgtgcaggcgcagaacgccgaggtctccgccggtgaactgggc
ggtgcacccgccgtcccgggccagcaattgaacgccaccgtgacggcgcaaagccgcctg
cagacggccgagcagttcggcgcgatcctgttgaagacgatggagaacggcgccaccgtg
cacctctcggacgtggccaagatggaactgggccgcgagaactacaacacggtcgcccgc
ttcaacggcaagccggccgccggtatcgccatcaagctcgccaccggcgccaacgcgctc
gataccgccgaagcggtcaagcagcgcatcgacgagatgagcaaactcttcccgcaaggg
atgaaggcggtcgtggcgttcgacacgacgccgttcgtcaagctctcgatcgaggaagtg
gtcaagacgctggcggaagccatcgtgctggtgttcctcgtgatgtacctgttcctgcag
aacttccgcgccaccctgatcccgaccatggccgtgccggtcgtgctgctggggaccttc
gcgatcctgtcggcgctgggctactccatcaacacgctgacgatgttcgcgatggtgctg
gcgatcggcctgctggtcgacgatgcgatcgtcgtggtggaaaacgtcgagcgcgtgatg
acggaggagggcttgtcgccgaaggaagcgaccaagaagtcgatgggccagatctccggc
gccctggtcggtatcgcgctggtgctgtccgccgtgttcgtgccgatggcgttcttcggc
ggctccacgggcgtcatctaccgccagttctcgatcacgatcgtctcggccatggtgctg
tccgtgctggtcgcgatggtgttcacgccggcgctgtgcgccacgttcctgaagcccgtc
gagaagggccaccacatgaccaaccgcggtttcttcggctggttcaaccgcaatttcgaa
gcgggcaccaacaagtaccagggctgggtcggcaacatgatccgccgcagcggccgttcg
atggtggtctatgccgtgctgctggccgtgctggcgctggtgttcctgcgcctgccgacc
tccttcctgccgcaggaagaccagggcgtgctgttctcgcagatccagctgccgaccggt
gccacgcaggagcgcacgctgaagaccatcgagaaggtcgagcaacacttcctgcagaac
gagaagggcaacgtggcctcgatgttcgcggtggcgggcttctcgttcggcggcaatggc
cagaacacgggtatcgccttcgtcaagctgaaggactggtccgagcgccatggcgcggaa
aaccgtgtcgacgcgatcgtcggccgtgccatgggcgcgttctcgcagctgcgcgacgcg
atggtgttcgccttcgcgccgccggccgtgctggaactgggtaacgcttccggcttcgac
ctgcagctgcaggaccagggtggcgtcggccacgaggcgctgatggcggcgcgtaaccag
ctgctcggcatggcgtcgcagaacaaggcgctggtgggcgtgcgcccgaacggccaggag
gatacgccgcagtacaagatcaccgtcgaccagcagaaggccaccgcattgggcctgagc
gtggcggacgtgaacaaggtgctgtcggtgggctggggctcggcctacgtcaacgacttc
atcgaccgcggccgcgtgaagaaggtgttcatgcagggccaggccgacgcgcgcatggtg
ccggaagacctgaacaaatggttcgtgcgcaatgcctcgggcgagatggtgccgttctcc
gccttcgcccatggcgagtggagctacgcgtcgccgcgcctggagcgctacaacggcctg
tcgtcggtcaacgtgcagggcagcccggcgccgggcgtctcgtccggcgtggcgatggcc
gaagtggagaagatgctggcgcagctgccgcccgggatcggttacgaatggaccggcctg
tcggtggaagagcgcgaatccggttcgcagacgacgtcgctgtacgccatctcgatcctg
atcgtgttcctgtgcctggccgcgctgtatgaaagctggtcggtaccgttctcggtgctg
ctggtggtgccgctgggtgtcatcggtaccgtgcttgccacctggggcctgcacctgtcg
aacgacgtctacttccaggtgggcctgttgacggtggtcggcctgtcggcgaagaacgcg
atcctgatcgtggaattcgccaaggagctgcaggaagcgggccgcgacctgcgcgaggcg
acgctggaggcggtcaagctgcgcctgcggccgatcctgatgacgtcgatcgcgttcggc
ctgggcgtgctgccgctggccgtggcgagcggcgccggttccggcagccagaacgccatc
ggcgtgggcgtgctgggcgggatgctgacggcaacgttcctcggcatcttcttcgtgccc
gtgttcttcgtgctggtgcgcagctggttcgccagccgcgccaagccggcgccgggtgcg
gatgcaatcttgaaggaagcacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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