KEGG   Metamycoplasma arthritidis: MARTH_orf852
Entry
MARTH_orf852      CDS       T00724                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mat  Metamycoplasma arthritidis
Pathway
mat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MARTH_orf852 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mat03400]
    MARTH_orf852 (recD)
Enzymes [BR:mat01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     MARTH_orf852 (recD)
DNA repair and recombination proteins [BR:mat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MARTH_orf852 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 AAA_22 UvrD-helicase PIF1 DEAD SLFN-g3_helicase ResIII RsgA_GTPase AAA_12 nSTAND3 RNA_helicase T2SSE AAA_16 AAA_14 ATPase NTPase_1 AAA_7 AAA HHH_5 MeaB Mg_chelatase PhoH AAA_24 Sigma54_activat AAA_28 HTH_7
Other DBs
NCBI-ProteinID: ACF07572
UniProt: B3PNH0
Position
786169..788367
AA seq 732 aa
MEEFVKVTGVFKKAIYERANGYKVFSFAIAHQEHPKEPIKTNHFGTISVVFNKLDVEVDK
YYDLVLEYQEASRYPNSYNLISLNESEYWKLNYIVKFLQSPHFPGIGPITAKKIVDKFGF
DTIKILTDDSSLNFLEFGMKKEAFEQMQTYLRENKQAVEDQIFFLKLNLSPDFYEKVNQK
FLTLESFINTYRDNFYEFYFDQQGLKISDLAKINKFFHPEGHEFDKAMIIYQALENFFFD
SGNTKTQISTFYSYFFKNIERVTVEEFKNNLKPLIVANKVLLFDNKSSITTSKLREMEEY
IVERMHRVQNGRNSLRDIKFEDNQFDYDSLQIEAINSALNEKMVLITGSPGTGKTLITNR
IIEELLKYYPEDRMAIVTPTGRATININKLSSKKAVTIHSFLQWDPDKNIFKINESWPES
IECLIIDEFSMVSVDLFFNLLKGISTRTLAKIILVGDKNQLPSIGPGYLIHDFIEANIFK
TIELTKIYRQSENYEIIQDAIDINEGRAPSFLGKNSQFRETKKEELAKKITEEISELLKQ
GYSKRDIAILSPIYNYQTGIDYLNDSLAKFWKKLENSEQNQISKTRKICLDDKVLNTVND
PSKKVFNGEIGYVSKFTFDKENSNIITHVAVDFEDDEKTVVYTKSEFLKKTIPAYCTSVH
KYQGSECKVVLTVLFSEAKRLLSKKLIYTAITRSKRLSIVFGEKEALEFGVKNDNDSHRQ
TCIKELWKAITE
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggaagagtttgttaaagtaaccggcgttttcaaaaaagccatttatgaacgagcaaat
ggatataaagttttttcatttgcgattgctcaccaagagcatcctaaggagccaatcaaa
accaatcattttggcactattagcgtcgttttcaacaaattagatgttgaggttgacaaa
tactacgacttagttcttgaataccaagaggctagccgttatcctaatagctacaatcta
atttcgcttaatgaaagcgaatattgaaaattaaactatatcgtgaagtttttgcaaagt
ccgcattttcctggcataggccctattactgctaaaaagattgtcgataagtttggcttt
gacacgattaaaattctcactgatgatagctcgctaaattttttagaatttggtatgaaa
aaagaagctttcgagcagatgcaaacttatcttagagaaaacaaacaagccgttgaagac
caaattttcttcttaaagttaaatttgtcacccgatttttatgaaaaagttaatcaaaag
tttttgacattagaaagttttattaacacttatcgcgataatttttatgaattttatttt
gatcaacaaggcctaaaaatctcagacttagcaaaaataaataagttttttcaccctgag
ggacacgaatttgataaggctatgattatttatcaagcattggaaaatttcttttttgat
agtggcaatactaaaactcaaatttcaaccttctatagctacttttttaaaaatatcgaa
agagtcaccgttgaagaatttaaaaacaacttgaagccattaatcgttgctaacaaagtt
cttttattcgacaacaagagttctattactacttctaagctgcgcgaaatggaagagtat
attgttgaaagaatgcaccgggttcagaatggtcgcaactcattaagagatattaaattt
gaagataaccaatttgattatgatagtttgcaaatcgaagcaatcaacagcgctcttaat
gaaaaaatggtcttaatcactggcagtcctggcactggtaaaactttaattactaatcga
attattgaagaattgctgaagtattatccagaagatcgtatggcaattgttactcccact
ggaagggcgacgattaatatcaataaactctcttcaaaaaaagctgttactattcatagc
tttttacaatgagatcctgataaaaatatttttaagattaatgaaagttgaccagagtca
attgaatgtttaattattgatgaattttcgatggtgagcgttgatttattttttaattta
ttaaagggcatttcaacacggacacttgcaaaaataattctggttggcgataaaaatcaa
cttccttctataggaccaggttatttgattcatgattttattgaagcaaatatatttaaa
acaattgaattaactaaaatttatcgtcaatcagaaaactatgaaattattcaagatgct
attgatataaacgaagggagagcgccttcatttttaggcaagaattcgcaatttagagaa
actaaaaaagaagagttggctaaaaaaattactgaagaaattagtgaattgttaaaacaa
ggttatagcaagcgcgacattgctattcttagcccaatttataactatcaaacagggatt
gattatttaaatgattcactagctaaattttgaaaaaaacttgaaaattctgaacaaaat
caaatttctaaaactagaaaaatttgccttgatgataaagtactaaatactgtaaatgat
ccttctaaaaaagttttcaatggtgaaattggctatgtttctaaatttacttttgataaa
gaaaattctaatatcatcacgcatgtcgcagttgattttgaagacgatgaaaaaaccgtt
gtctatactaagagtgaatttcttaaaaaaactatcccagcttattgcactagtgtgcat
aaatatcaaggtagcgaatgtaaagtggttttaacggttctttttagcgaagcaaaaagg
cttttaagtaagaaattaatttacacagccattacgcgctcaaaaagactaagcattgtt
ttcggcgaaaaagaagctcttgaattcggtgtaaaaaatgataacgactcacatcgacaa
acctgtattaaagaattgtgaaaggcaataacggagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (41)   

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