KEGG   Mesocricetus auratus (golden hamster): 101839371
Entry
101839371         CDS       T08306                                 
Symbol
Dicer1
Name
(RefSeq) endoribonuclease Dicer isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
maua  Mesocricetus auratus (golden hamster)
Pathway
maua05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:maua00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    101839371 (Dicer1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:maua03036]
    101839371 (Dicer1)
Chromosome and associated proteins [BR:maua03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    101839371 (Dicer1)
   microRNA pathway
    RISC loading complex
     101839371 (Dicer1)
SSDB
Motif
Pfam: Dicer_platform Dicer_dsRBD Ribonuclease_3 Dicer_PBD Ribonucleas_3_3 Dicer_dimer PAZ Helicase_C ResIII DEAD Amidoligase_2
Other DBs
NCBI-GeneID: 101839371
NCBI-ProteinID: XP_005068415
EnsemblRapid: ENSMAUG00000009936
UniProt: A0A1U8BJE3
Position
Unknown
AA seq 1917 aa
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRAKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYASQPCEIVVDCGPFTDKSGLYERLLMELEEALNFINDCNVSVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCE
EHFSPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKSQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIQSFEEDLKTYKAIEKILRNKCSKSVDGAEAD
VDAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTQELPD
GTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPKPGQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSQ
QMLELITRLHQYIFSHILRLEKPALEFKPTGAESAYCVLPLNVVNDSSTLDIDFTFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPADFRYPNLDFGWKKSIDSKSFISTCNSSLAENDNYCKHSTIIVPENAAHQGATR
TPLENHDQMSVNCRRLPAESPGKLQIEVSTDLTAINGLSFNKNLANGSYDLVNRDFCQGN
QLNYFKQEIPVQPTTSYPIQNLYHYENQPKPSNECTLLSNKYLDGNANTSTSDGSPAVST
MPAVMSAVKALKDRMDSEQRPSVGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNAEKWEKDEMTKDCLLANGKLGKDCEEGEDLTWRAPKEEAEYEDDFLE
YDQEHIQFIDSMLMGSGAFVKKISLSPFSTSDSAYEWKMPKKSSLGSMPFSSDLEDFDYS
SWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVE
ALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQQKSLSGSCAAA
AASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYRFKNKAYLLQ
AFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIF
ASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVP
KAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETA
KFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq 5754 nt   +upstreamnt  +downstreamnt
atgaaaagccctgctttgcagcccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaataccaggttgagctgctggaagcagctctggaccataacacc
attgtctgcttgaacaccggctcagggaagacgttcatcgcagtcctgctcaccaaagag
ctggcccatcagatcaggggtgacctcaacccacgtgcaaaaaggaccgtgttcctcgtc
aactctgcaaaccaggttgctcaacaagtttcagctgtcagaactcactcagacctcaag
gttggggagtactcaaacctagaagtaaatgcatcttggacaaaagagagatggagccaa
gagttcactaagcaccaggttctcattatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttgtcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
attctagaccacccctaccgagaaattatgaagctctgtgaaagttgtccatcatgccct
cgaattttgggactaactgcttccatcttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggagaagattcttaagagtaatgctgagactgccactgacctg
gtggtcttagacagatacgcttctcagccatgtgagattgtggtagattgtggaccattt
actgacaaaagtgggctttatgaaaggctgctgatggaattagaagaagcacttaatttt
atcaatgactgtaatgtatctgtacattcaaaggaaagagattctactctgatctccaaa
caaatactctcagactgccgtgcggtgttggttgttctgggaccctggtgtgcggacaaa
gtagctgggatgatggtaagagaactgcagaagtacatcaaacatgagcaggaggagctg
cacaggaagttcttattgtttacagacactctgctgaggaaaatacatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaagtatgtaactcctaaagtaatgaaactg
ctcgagatcctgcgcaaatacaagccctatgagcgacagcagtttgaaagtgttgagtgg
tacaataataggaatcaagataattatgtgtcctggagtgattctgaggatgatgatgac
gatgaagaaattgaagaaaaagaaaagccagagacaaattttccttctccatttaccaat
atcttgtgtggaatcatttttgtggaaagaagatacacagcagttgtcctaaacaggttg
ataaaggaagctggcaagcaggacccagagctggcttatataagcagcaactttataact
ggacacggcattggcaagagccagcctcgcagcaaacagatggaagcggagttcagaaaa
caggaggaggtacttaggaaatttcgagcacacgagactaacctgctcattgcaacaagt
gttgtagaagagggtgtggatattcccaagtgcaatttggtggttcgttttgatttgccc
acggagtatcgatcatatgttcagtccaaaggacgagcccgagccccgatctctaattat
gtgatgttggccgatacagacaagatacaaagctttgaagaagaccttaagacctacaaa
gctatagaaaagattttaagaaacaagtgttccaaatcagtggatggtgctgaggctgac
gttgatgccgttgtagatgatgatgatgttttcccaccatatgtattgaggcctgatgat
gggggtccacgggtcacaatcaacactgccattggacatattaacagatattgtgctcga
ttaccaagtgatccgtttactcatctagctcccaaatgtagaacacaagagttgcctgat
ggtacattttattcaactctttatcttccgattaactcacctcttcgagcctccattgtt
ggtccaccaatgggctgtgtacggttggctgaaagagtggtagctctcatttgctgtgaa
aaactgcacaaaattggtgaactggatgaacatttgatgccagttgggaaagagactgtt
aaatatgaagaagagcttgacttacatgatgaagaggaaaccagtgttccaggaagacca
gggtccacaaagcgaaggcagtgctaccccaaagcaatcccagagtgcttgagggagagt
taccctaagcctggtcagccttgctacctgtatgtgatagggatggtcttaactacccct
ctccctgatgaactcaacttcaggcgacggaaactctaccctcctgaggacaccacaaga
tgctttgggatcctgacagccaaacccatacctcagattcctcactttcctgtgtacaca
cgctctggagaggtcaccatatccattgagctgaagaagtctggcttcacactgtctcaa
caaatgctcgagctgattacaagactccaccagtatatattctcacacattcttcggctt
gaaaaacctgccctagagtttaaacctacaggcgctgagtcagcatactgtgttctacct
cttaatgttgttaatgactctagcactttggacattgactttacattcatggaggatatt
gagaagtctgaagctcgaataggcattcccagcactaagtattcaaaagaaacaccattt
gtttttaagttagaagattaccaagatgcagttatcattccaagatatcgcaattttgat
cagcctcatcgattttatgtagctgatgtgtatactgatcttaccccactcagtaaattt
ccttcccccgagtatgaaacttttgcggaatattataaaacaaagtacaaccttgacctg
accaatctcaaccagccgctgctggatgtcgaccacacatcttccagacttaaccttttg
acacctcggcatttgaatcagaaggggaaagcacttcctctaagcagtgctgaaaagagg
aaagccaaatgggaaagtctgcagaacaaacagatactggttccggaactctgtgctata
catccaatcccagcatcactgtggagaaaagcagtttgtctccccagcatactttatcgc
cttcactgccttttgactgcagaggagctaagagctcagacagccagcgatgctggcgtg
ggagtcagatcacttcctgcggattttagataccctaacttagacttcgggtggaaaaaa
tctattgatagcaagtctttcatctcaacttgtaactcctcgttggctgaaaatgataat
tactgtaagcacagcacaattatagtccctgaaaatgctgcacatcaaggtgctactaga
acccccttagaaaaccatgaccaaatgtctgtgaactgcagaaggctacctgctgagtca
cctggtaagctccaaattgaagtttcaacggatcttacagcaatcaatggtctttctttc
aacaaaaatcttgccaatggcagttatgatttagttaacagagacttttgccaaggaaat
cagctgaattacttcaagcaggaaatacctgtgcaaccaactacctcatatcccattcag
aatttataccattatgagaaccagcccaagcccagcaatgaatgtactctactgagtaat
aaataccttgatggaaacgctaacacatctacctcagatggaagccccgcggtgtctacg
atgcctgccgtgatgagtgctgtgaaagcactcaaggacaggatggattctgagcagcgc
ccttctgttgggtactcctcgaggactcttggccccaaccctggactgattcttcaggct
ctgacactgtcaaatgctagcgatgggtttaacctggagcggcttgagatgcttggcgac
tcctttttaaagcatgctatcaccacatatctcttttgcacttaccctgatgctcacgag
ggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaacctgtatcgccttggc
aagaagaaggggctgcccagccgcatggtagtgtccatatttgatcctcctgtgaattgg
cttcctcctggttatgtggtcaatcaagacaaaagtaacgcagagaaatgggaaaaggat
gaaatgacaaaagactgcttgctggctaatggcaaactaggtaaggactgcgaggagggg
gaggacctgacgtggagggcacccaaggaggaggctgagtatgaagacgacttcctggag
tatgatcaggagcacatccagtttatagacagcatgttaatggggtcaggagcctttgtg
aagaaaatttctctttctcctttttcaacctccgattctgcttatgaatggaaaatgccc
aaaaagtcctccttaggcagtatgccattttcctcagacctcgaggattttgactacagc
tcttgggatgcaatgtgctatctggatcctagcaaagcagttgaagaggatgactttgtg
gtgggtttctggaatccatcagaagaaaactgtggcgttgacacagggaagcagtccatt
tcttacgacttgcacacggagcagtgcattgctgacaaaagcatagcagattgtgtggag
gccctgctgggctgctatttaaccagctgcggcgagagggctgctcagcttttcctctgt
tcgctggggctgaaggtgctcccagtcatcaaaaggaccagccgggaaaaggccctgtac
cctgctcaggagaacttcagcagccaacaaaagagcctttcagggagctgtgctgccgcc
gcagccagcccacgctcctctgcagggaaagacttggagtacggctgcctgaagatccca
ccaaggtgtatgtttgaccatccagatgcagagaaaaccttgaaccacctgatatctgga
tttgaaaattttgagaagaaaatcaactacagattcaagaataaggcttaccttctgcag
gcttttacacatgcctcctaccactacaacactatcactgattgttaccagcgcttagaa
ttcctgggagatgcgattttggactacctcataaccaagcacctttatgaagacccgcgt
cagcattccccaggggtcctgaccgacctgcgctctgccctggtcaataacaccatcttt
gcatctttggctgtgaagtatgactaccacaagtactttaaagctgtctctcccgagctc
ttccatgtcattgacgactttgtgcagtttcagcttgagaagaacgagatgcaggggatg
gactctgagcttaggagatccgaggaggatgaggagaaagaagaggatatcgaagtcccc
aaggccatgggggacatttttgaatctcttgctggtgccatttatatggacagtgggatg
tctctggaggtggtctggcaggtgtactacccaatgatgcggccactaatagaaaagttt
tctgcaaatgtgccccgttctccagtgagagaattgcttgagatggaaccagaaactgcc
aagtttagcccggcggagagaacttacgatgggaaggtcagagtcaccgtggaagtggtg
ggaaaggggaaatttaaaggtgtcggccggagctacaggatcgcaaagtctgctgcagca
agacgagccctccgcagcctcaaagctaaccagcctcaggttcctaacagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system