KEGG   Methanosarcina barkeri 227: MSBR2_0224
Entry
MSBR2_0224        CDS       T03914                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
mbar  Methanosarcina barkeri 227
Pathway
mbar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mbar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MSBR2_0224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbar03400]
    MSBR2_0224
DNA repair and recombination proteins [BR:mbar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MSBR2_0224
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR GIY_YIG_2 DUF3008 dCache_1
Other DBs
NCBI-ProteinID: AKB56740
UniProt: A0A0E3QY33
Position
complement(284097..285656)
AA seq 519 aa
MIDLEALPHLPGCYLFKNEEGTVIYVGKAKDLKKRVSSYFQKRDHDPKTASLIEAVTDLD
FIVTNTEVEAFLLENTLIKKHWPRYNIALKDSKRYACIHLTDEKFPRIKLARKKADGGSF
FGPFVSAKERDYIFEVVRKTFQLRTCKKMPKRACLRYHIAACSGPCIGAISAEDYAEKVK
KAASVLKGNIRELIESMEKEMRELASRQQFEQAMVLRDEIAALEYLQEKQNMERQKKHNE
DILNYIVRDDTVYLMLFKVYKGTLEDKQDYVFAFGENFLEEFLVQYYSENEPPEELILPE
PLEESLVDFLSHVKGTKVKVTVPKQGEKKELLALALKNVEIGFFGDRKKLEALQSKLSLP
KLPNVIECFDISHLSGTATVGSMVQFRGGRPDKHNYRRFKIESVEGIDDFASIAEVVRRR
YSRLLEDKHDLPDLIIIDGGKGQLSSAFQELRKLKIRVPLISIAKREEEIYVPGIKSPLP
IKKNEKASLFVQEIRDEAHRFAITYNRLLRQKSMIPKND
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgattgacctggaggctctacctcacctacctggctgttatcttttcaagaatgaagaa
gggactgtgatttacgtaggcaaggcaaaggacctcaaaaagcgggtaagcagctatttc
cagaaacgagaccatgatccaaaaactgcgagccttatagaggctgtaacggacctcgat
tttattgtcacgaacactgaagtagaggcttttcttctggaaaatactcttatcaaaaaa
cattggccaaggtataatattgctcttaaggactcaaaaaggtatgcctgcattcattta
actgatgaaaagtttccaaggatcaagctcgcccggaaaaaagcagatggtggaagcttt
tttgggccctttgtctcggcaaaggaaagagactacatttttgaagttgtaagaaagact
ttccagcttcggacctgtaaaaagatgccgaaacgggcctgcctcagataccatatagcg
gcatgcagcgggccctgcataggtgcaatttccgcagaagactatgccgagaaagtgaag
aaagcggcctcggtcctgaaaggcaatatcagagagcttatcgagtctatggaaaaagaa
atgagggagctggcatcgaggcagcagttcgagcaggccatggttctcagggacgagatt
gcagcccttgagtatcttcaggaaaaacaaaatatggagaggcagaaaaagcataatgag
gatattctgaactacattgtcagggatgataccgtttatctcatgctcttcaaggtctac
aaaggtacacttgaagataaacaggactatgtttttgcctttggggaaaattttctggaa
gaatttcttgtacaatattattccgagaacgaacctcctgaagaactaattcttcctgaa
cctctcgaagaatcgcttgttgacttcctttctcacgtcaaaggaacaaaagtcaaagtt
acggttccgaaacagggagagaaaaaggaacttctcgcccttgccctgaaaaatgttgag
ataggtttctttggagaccggaaaaagctcgaagccctgcagagtaaactatcccttccg
aaacttccgaatgtcatagaatgttttgatatctctcatctctcaggcacggctacggtc
ggttcaatggttcagttccgtgggggcagacctgataaacacaattatcgccgcttcaag
atcgagagtgttgaagggatcgatgactttgcttccattgcagaggttgtacgcaggcgt
tattctcgcttgctcgaggacaagcatgacctacctgaccttatcattatagacggggga
aaaggacagctttcttcagcttttcaggaactcagaaagctcaaaatcagggttcctctt
atttcgatagccaagcgggaagaagaaatctatgtgcccggaatcaagtctcctcttccc
atcaaaaaaaacgagaaagcctctctttttgtccaggaaatccgggacgaagctcacagg
tttgcaattacctataaccgcctgctaaggcaaaaatctatgattcctaaaaatgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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