KEGG   Mycoplasmopsis bovis HB0801: Mbov_0848
Entry
Mbov_0848         CDS       T02143                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mbi  Mycoplasmopsis bovis HB0801
Pathway
mbi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Mbov_0848 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbi03400]
    Mbov_0848 (recD)
Enzymes [BR:mbi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Mbov_0848 (recD)
DNA repair and recombination proteins [BR:mbi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Mbov_0848 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 SH3_13 UvrD_C_2 Viral_helicase1 UvrD-helicase AAA_11 PIF1 AAA_22 SLFN-g3_helicase AAA_12 Helicase_RecD PhoH RsgA_GTPase NACHT AAA_16 cobW RNA_helicase AAA_18 CGI-121
Other DBs
NCBI-ProteinID: AFM52192
Position
complement(989249..991519)
AA seq 756 aa
MIVSSNSNQELIKLKGKFLTIKWSGADSSGTRELWIFESISDKERYFIYSSKQGIKSSCF
YDIEIKAKSFKRSKYQNQSYELISCKIVSPDNDSDVEKMLVSNVSGLGVKGIQKIKKELN
LSSIKELFKDVTVVQNVLKTAVYENLKAFIESFDQKDYDFFYENGLLKLYDKLHTKFENK
DFVSRYKNGGDPYELYVDHWIDFKLVDAFASIINPELDAYKKVRAFTYKILRTNFSSLCS
MYYDDTPLYRQLWNFYDLYRNDNSDNSTLFEQSYIVSLLGILLGKYSISNDLIIESLKIM
IQRGEIYFDNLSKRLSLNEIYEQELFISKKLIKIRDQEIKKQIIPLPSQNLSNEQKEAYS
SALNNPISVITGYPGTGKSYLIAYIVETLLEGKYYKKKDIAVLTPTGRASTILTYKTGIE
AKTIHSFLKLSKPDEDESFIESFEKENPVKVVVVDEFSMVSLPIFYELLKICKSIEKLIL
VGDRDQLPCIGKGNLLEDIINSQKFPTFVLKEVHRTDKIDIFDHFISINENKVPNLNTAN
VKFIEQNGTQFLNNIVRIYEEKTNKYSIDNVIILLPSYLELGQPGINEVNKRLQDWNVKR
TGAKKNLFIYNNLTLFIGDRVIQTINDYDKNVFNGEIGIVEEITSNNRNGHIIVAFGNGK
KIKYTKSEILENLSLAYAITVHKFQGSEASCVIFGILKNRVEHMFTKKFMYTAVSRAKEE
LLLLGSMDLYTQKIQSPNADLKYYTNLKMLIEKEAE
NT seq 2271 nt   +upstreamnt  +downstreamnt
atgattgtatcaagcaatagtaatcaagaattaattaaattaaaaggaaagtttttaacc
atcaaatgaagcggggctgacagtagtgggacaagagagctctggatttttgagtctatt
tctgacaaagaacgctattttatttatagtagtaaacaaggaattaaaagttcttgtttt
tatgatattgaaattaaagcaaaatcatttaaacgttctaagtatcaaaaccaatcatac
gaattgattagttgcaaaattgttagtcctgataacgacagtgatgttgaaaaaatgcta
gtaagtaatgttagcggcctaggggtaaaaggaatccagaaaataaaaaaagaattaaac
ttatcaagtataaaagagttatttaaggatgttactgttgtccaaaatgtgcttaaaaca
gcggtatatgaaaatttaaaggcgtttattgaaagtttcgatcaaaaagattatgacttt
ttttatgaaaatggtcttttgaagctgtatgacaaactgcatacaaaatttgaaaataaa
gattttgttagcagatataaaaatggtggagatccatatgaattatatgttgatcactga
attgattttaagcttgtagatgcttttgcttcgattattaatcctgagttagatgcttac
aaaaaagtaagagcgtttacttacaaaatattaagaacaaattttagtagtctttgttca
atgtactacgatgacacaccattatataggcaattgtgaaatttttatgatttatataga
aatgataattctgacaatagtacactttttgaacaatcttacattgtttcattattaggt
atattgttgggaaaatatagtatttccaatgatttaatcattgagtctcttaaaataatg
attcaacgtggtgaaatatattttgataatttatctaaaagactttcattgaacgaaatt
tatgaacaagaactttttattagcaaaaaacttataaaaataagagatcaagaaataaag
aaacaaattattcccttaccatcacaaaatttatcaaatgaacaaaaggaagcttattct
agtgcattaaataatccgatctctgtaataactggctatccaggaacaggaaaaagttat
ttaatcgcttatattgtagagacattattagagggtaaatattataagaaaaaagatatt
gctgttttaactccaacaggtagagcatctaccatattaacctataaaacaggtatagaa
gccaaaacaattcatagttttttaaaactttcaaagcctgatgaagatgaatcattcatt
gaatcgtttgaaaaagaaaacccagtcaaagttgttgttgttgatgagttttcgatggtc
agtttaccaatattttatgaattattaaagatatgcaaaagcattgaaaaattaattctt
gttggtgatagagaccaattaccatgtattggaaaagggaacttattagaagatataata
aacagtcagaagtttccaacatttgtattaaaagaagtgcatagaacagataaaattgac
atatttgatcattttatatctataaacgaaaacaaggttccgaatttaaatactgctaat
gtcaagtttattgaacaaaatggcacccagtttttaaataacattgtcagaatatatgaa
gaaaagactaataagtattctattgataatgtaataattttacttccttcatatttagaa
ttaggtcagccaggaataaatgaagttaataagagacttcaggattgaaatgtcaaaaga
acaggcgcaaagaaaaatttatttatttacaataatttaaccttgtttataggcgacaga
gttattcaaacaataaatgattacgataaaaacgtgttcaatggcgaaattggaattgtt
gaagagataacttcgaacaacagaaatggacatataattgttgcatttggaaatggcaag
aagattaaatatacaaaaagcgaaattttagagaatttatcgttagcatatgctataaca
gtgcataagtttcaagggtcagaagcaagctgtgttatattcgggattttaaagaataga
gttgaacatatgtttactaaaaaatttatgtatacagctgtttcgagagcaaaagaggaa
ttattgctccttgggtcaatggatttatatactcaaaaaattcaatctccaaatgctgat
ttaaaatactacacaaatttgaaaatgcttattgagaaagaggcagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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