KEGG   Monosiga brevicollis: MONBRDRAFT_15252
Entry
MONBRDRAFT_15252  CDS       T01042                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
mbr  Monosiga brevicollis
Pathway
mbr03018  RNA degradation
mbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MONBRDRAFT_15252
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MONBRDRAFT_15252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbr03019]
    MONBRDRAFT_15252
   03041 Spliceosome [BR:mbr03041]
    MONBRDRAFT_15252
Messenger RNA biogenesis [BR:mbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MONBRDRAFT_15252
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MONBRDRAFT_15252
Spliceosome [BR:mbr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MONBRDRAFT_15252
 Complex C
  U2 snRNP components
    MONBRDRAFT_15252
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5889071
NCBI-ProteinID: XP_001743683
JGI: 15252
UniProt: A9UTK3
AA seq 93 aa
MDGRSVEEPLDLVRLSLEEKVLVKMRGDRQLEGTLHAYDQHMNMVLSNVVETLATVDVDD
ETGEELVKTAKRVLPMLYVRGDGVILVAPPHRA
NT seq 282 nt   +upstreamnt  +downstreamnt
atggacggccgctcggtggaggagcccctggaccttgtacgcctctccctcgaggagaag
gtgctggttaagatgcgtggtgatcgtcagcttgagggcacgcttcatgcgtatgatcag
cacatgaacatggtcttgagcaacgtcgtcgaaacgctggccaccgtcgatgtggatgat
gagacaggcgaggagctggtcaagactgccaaaagggtgctgcccatgctgtatgtgcgt
ggtgatggtgttatcttggtggcaccaccccatcgtgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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