KEGG   Methanococcoides burtonii: Mbur_1178
Entry
Mbur_1178         CDS       T00341                                 
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase subunit B'
  KO
K03044  DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
Organism
mbu  Methanococcoides burtonii
Pathway
mbu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mbu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Mbur_1178 (rpoB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbu03021]
    Mbur_1178 (rpoB1)
Enzymes [BR:mbu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Mbur_1178 (rpoB1)
Transcription machinery [BR:mbu03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     Mbur_1178 (rpoB1)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 DUF1451 zf-NADH-PPase
Other DBs
NCBI-ProteinID: ABE52101
UniProt: Q12WS5
Position
complement(1267426..1269240)
AA seq 604 aa
MVEAKVFLDGELIGTHNDPVELVESIRGQRRSGMLPHQLNVTLYEDIHEVILSSDIGRAR
RPAIVVENGVPSITAEYVEKVRDGEISFRDLLDMGYVEYLDAEEEENAFIGLYEEDLTPN
HTHLEIDPSLMLGICTGMVPYPEHNASPRNTMGAAMIKQCIGVSSSNLKLRPDTRAHVLH
YPQKAMTRTQTCDAIHFDERPAGQNFVVAVMSYEGHNIEDALVFNKGSIQRGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEFRGARSADAYANLDIDGLVNPETVVGPNDVLIGKTSP
PRFLEEQSDFGITIEQRRESAITMRSNEKGIVDTVILTESINGTRLAKVKIRDERIPEIG
DKFASRHGQKGVIGLIVPYHDMPFTELGMVPDLVINPHAIPSRMTVAHVLEMIGGKLGSL
EGQRKWGTAFSGDMEDGIRDGLKNRGFSHTGKEVFCDGVTGKKIQADVFVGVILYQKLHH
MVASKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMTLKERLLDESDK
VVELVCAQCGMVATFDRTRNIRYCSNCGAETDIHPVEMSYAFKLLLDEIKSLGVAPRLRL
DDAV
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggttgaagcaaaagtcttcctcgatggggaacttatcggaactcacaatgatccggta
gagcttgtcgagagtattagggggcagcgccgtagtggcatgttgcctcaccagttgaat
gtaacgctttatgaggatattcatgaagtgatcctcagttctgatataggtcgtgcaaga
aggcctgcaatagttgttgaaaatggtgtcccgtcgatcacggcagagtatgtcgagaaa
gtccgggatggtgagatctcgttccgcgatcttctggacatgggatatgttgaatatctg
gatgctgaggaggaagagaatgcattcattggtctttatgaagaagaccttactcctaac
cacactcatctagagatcgatccttccttgatgcttggtatctgtaccggtatggttcca
tatcctgagcacaatgcttctccgaggaacacgatgggtgcagctatgatcaagcagtgt
ataggagtttcttcatccaacctgaaacttaggcctgatacacgtgcgcatgtgcttcac
tatccgcagaaggcaatgacacgcactcagacctgtgatgctatccatttcgatgagcgt
cctgctgggcagaacttcgttgtcgctgtcatgtcctacgaagggcataacattgaggat
gcactggttttcaataaaggttccattcagagaggacttggaagaagccacttcctgagg
accttcgaaggtgaagaacgccgttatcctggtggacaggaagacaagttcgagatccct
gattctgagttcagaggtgcccgtagtgcagatgcatatgcaaacctcgacattgacggt
cttgtaaatcctgagactgttgtaggtccaaatgatgtgcttattggtaagacaagtcct
ccaaggttccttgaagaacagtctgactttggtataaccattgaacagcgcagagaaagt
gcaattacgatgcgctcgaacgagaaaggtattgttgatactgttattcttactgaatct
atcaatggtacaaggctcgcaaaggtgaaaatcagggatgaaaggatccctgagatcggt
gacaagttcgcatcaagacacggtcagaagggtgttatcggattgatagttccgtatcat
gatatgccatttacggaactgggtatggttcctgatcttgttattaatcctcatgctatc
ccttcacgtatgaccgttgctcacgttctggaaatgatcggtgggaaactcggttctctt
gaaggtcagcgtaagtggggcactgcattctccggtgatatggaggatggtattcgcgat
gggcttaagaatcgtggtttctcacatacagggaaagaggtgttctgtgatggtgttact
ggtaagaagatccaggcggatgtttttgttggtgttatcctttaccagaaactccaccac
atggtcgcatcaaagatccatgcaaggtccagaggccctgtgcaggtattgacccgtcag
ccaaccgagggtcgtgctcgcgaaggtggtcttaggtttggtgagatggaaagggatgta
ctgatcgggcacggtgctgcgatgaccttgaaggaaaggcttctcgatgagtctgacaag
gtcgtagaacttgtatgcgctcaatgtggtatggtggcaacttttgacaggactcgtaat
atcagatactgttcgaactgtggtgctgaaacggatattcacccggtggaaatgagttat
gctttcaagttgcttcttgatgagatcaaatcccttggggttgctccaagacttagactt
gatgatgcggtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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