KEGG   Methanosarcina barkeri Wiesmoor: MSBRW_0435
Entry
MSBRW_0435        CDS       T03839                                 
Name
(GenBank) Endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
mbw  Methanosarcina barkeri Wiesmoor
Pathway
mbw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mbw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MSBRW_0435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mbw03400]
    MSBRW_0435
Enzymes [BR:mbw01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MSBRW_0435
DNA repair and recombination proteins [BR:mbw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MSBRW_0435
 Prokaryotic type
     MSBRW_0435
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 RecR_HhH HHH_8 EndIII_4Fe-2S 5_3_exonuc bacHORMA_1 DUF2400
Other DBs
NCBI-ProteinID: AKB49688
UniProt: A0A0E3QI92
Position
510113..510820
AA seq 235 aa
MPEKKSKKSDNQGFVSEYDLPDNRHNFDRIWALLKEEYPDVKPSLNYSNPLELLVATVLS
AQSTDVQINRVTEKLFKKYRTAEDYASADLRELENDLYSTGFYKSKAKNIKTAAQMIVEK
YNGEVPKTMEELTSLPGVGRKTANIVLARAFGVVEGVAVDTHVKRVSRRLGLTKNSDPAK
IEQDIVSLARREDLDSISMTLIYHGRKVCQAKKPKCKICIVKDLCPSSVIFISSA
NT seq 708 nt   +upstreamnt  +downstreamnt
atgcctgaaaaaaagtcaaaaaaatctgataatcagggtttcgtttccgaatatgatctt
cctgataacagacacaatttcgaccggatctgggctcttttaaaagaagagtatcctgac
gtaaaaccctctcttaattacagcaatccacttgaactgcttgtggcaactgttctttca
gcccagtcaactgacgtacagattaatagagtaactgagaaactgttcaaaaagtacagg
actgcagaagattatgccagtgcagacctcagggaacttgaaaacgatctatattccaca
ggtttttacaaaagcaaggcaaagaatatcaaaactgctgcgcagatgattgtagagaag
tacaatggagaagtcccgaaaactatggaagaacttaccagtttgccaggggtcggaagg
aaaacggctaatatagtacttgccagagcattcggggtagtagagggagttgctgtagat
acccatgtaaaaagggtttcaagaaggctgggacttacgaaaaactccgaccccgctaaa
attgaacaggacattgtctcacttgcacgaagggaagatcttgattcaatctccatgacc
ctgatctatcatgggaggaaagtctgccaggcaaaaaaaccaaaatgtaaaatctgtatt
gtaaaggacttatgtccttcgagtgttatatttattagcagtgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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