KEGG   Methanosarcina barkeri MS: MSBRM_0487
Entry
MSBRM_0487        CDS       T03838                                 
Name
(GenBank) Geranylfarnesyl diphosphate synthase
  KO
K13787  geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
mby  Methanosarcina barkeri MS
Pathway
mby00900  Terpenoid backbone biosynthesis
mby01100  Metabolic pathways
mby01110  Biosynthesis of secondary metabolites
Module
mby_M00365  C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:mby00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    MSBRM_0487
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:mby01006]
    MSBRM_0487
Enzymes [BR:mby01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     MSBRM_0487
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     MSBRM_0487
    2.5.1.29  geranylgeranyl diphosphate synthase
     MSBRM_0487
Prenyltransferases [BR:mby01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   MSBRM_0487
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: AKB53485
UniProt: A0A0E3QSM8
Position
601576..602541
AA seq 321 aa
MTLVDEIKKRSVHVDAAIDELLPVVRPEELYKASRYLVDSGGKRLRPAVLILAAEATGSE
LKSVLPAAVAVELVHNFTLIHDDIMDKDELRRGKPAVHMIWGEAGAILAGDTLYSKAFEI
LSKVENEPARILKCMDVLSKTCTEICEGQWLDMDFEKREKVSKAEYIEMVEKKTSVLYAA
AAKIGALLGGASDEIAEALSEYGRFIGIGFQMYDDVLDMVTPEEVLGKVRGSDLMEGKHT
LIVIDAFEKGVKLDIFGKGEATQEETDEAVRILTECGSIDYVKDLAISYINEGKAKLDAL
CDCPEKELLLQIADYMISRNY
NT seq 966 nt   +upstreamnt  +downstreamnt
atgacgttagttgatgagatcaaaaaaagaagtgtccacgttgacgccgcaattgacgaa
ctgcttccggtagtccgtccagaggagctatataaagcctctcgctacctggtagattca
ggaggaaaacgcctccgccccgcagttcttattctggcagccgaagctacaggctcggaa
ctcaagtctgtcttacctgcagcggtggccgtggaacttgtacataatttcactctgatc
catgacgacataatggataaggatgagttacgcagagggaagcctgcagttcacatgata
tggggtgaagccggagcaatccttgcaggtgacactctttattctaaagctttcgagatc
ctgtctaaagttgaaaacgagcctgcaaggattttgaaatgtatggatgttctttcaaaa
acctgtacagaaatctgcgagggccagtggcttgatatggattttgaaaagagggaaaag
gttagtaaagctgaatatattgagatggtggaaaaaaagacctctgtcctttatgcagct
gcagccaagatcggggctcttcttggaggagcttctgatgagattgctgaagccttatct
gaatatgggcgctttatagggattgggttccagatgtatgacgatgttctggatatggtc
accccagaggaagtgctcggtaaggtaagaggtagcgaccttatggaagggaaacatact
cttattgtaatcgatgctttcgaaaaaggtgtgaaactggacattttcggaaaaggggaa
gcaactcaggaagaaactgacgaagccgtccggattttaaccgaatgcggatcaattgat
tatgtaaaggaccttgcaatttcatatatcaatgaaggcaaagcaaaactggacgctctg
tgtgactgtccggaaaaggagcttctccttcagattgccgattatatgatctcaaggaac
tactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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