KEGG   Methylococcus capsulatus: MCA0321
Entry
MCA0321           CDS       T00205                                 
Symbol
xth-1
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
mca  Methylococcus capsulatus
Pathway
mca03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MCA0321 (xth-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mca03400]
    MCA0321 (xth-1)
Enzymes [BR:mca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     MCA0321 (xth-1)
DNA repair and recombination proteins [BR:mca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     MCA0321 (xth-1)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AAU90419
UniProt: Q60BZ2
Position
complement(316142..316915)
AA seq 257 aa
MRIITLNVNGIRSAARKGFFDWLPKQNADIVCLQEIKAQTTQLNDELFWPESYACYYLEA
EKKGYSGVALYARKEPDDVIQGLGWDDMDTEARYLEARFGELSVVSLYIPSGSSSEQRQA
VKFGFLDRFLPFLDDCARSGRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEERAWLDR
VFEEAGWVDAFRAVNPEPEQYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSAAIYKE
ERFSDHAPLIIDYDLTL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgagaatcatcacgctgaacgtgaacggcatccgctcggccgcgcgcaagggcttcttc
gactggctgccgaagcagaacgccgacatcgtctgtctgcaggaaatcaaagcccagacc
acccagctcaacgacgaactgttctggccggaaagctatgcctgttattacctggaagcc
gagaaaaaaggctacagcggcgtggccctctacgctcgcaaggagcccgacgatgtgatc
cagggcttgggctgggacgacatggacacggaggctcgttacctggaggcccgcttcggc
gagttgagtgtggtgtcgctgtacattccgtccggctcatccagtgaacagcgccaggcc
gtcaaattcggtttcctcgaccgtttcctccccttcctggacgattgcgcccgctccggc
cggcaatacattttctgcggcgactggaacatcgcgcacaagcccatcgacctgaagaac
tggcgttcgaatcagaaaaactccggtttcctgccggaggaacgcgcctggctggaccgg
gtgttcgaggaagcgggctgggtcgatgccttccgcgcggtcaatccggaaccggagcag
tacacctggtggtccaaccgcgggcaggcctgggccaagaacgtgggatggcgcatcgac
taccaggtcgtcagtccgggactgcgcgagctgatccgctccgcggcgatctacaaggaa
gagcgcttctccgatcacgccccgctcatcatcgactatgacctcaccctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system