KEGG   Methylococcus capsulatus: MCA1338
Entry
MCA1338           CDS       T00205                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mca  Methylococcus capsulatus
Pathway
mca02024  Quorum sensing
mca03060  Protein export
mca03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MCA1338 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MCA1338 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MCA1338 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mca02044]
    MCA1338 (ffh)
Enzymes [BR:mca01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MCA1338 (ffh)
Secretion system [BR:mca02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MCA1338 (ffh)
  Eukaryotic Sec-SRP protein
   MCA1338 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA AAA_30 AAA_33 AAA_16 cobW SRPRB YqeC AAA_24 Thymidylate_kin AAA_17 AAA_19 TsaE nSTAND3 6PF2K ArsA_ATPase Arf AAA_14 AAA_28
Other DBs
NCBI-ProteinID: AAU92610
UniProt: Q608Z7
Position
1422638..1423996
AA seq 452 aa
MFDNLTDRLSDSLRKLRGQGRLTEANVQDALREVRQALLEADVALPVVKDFIEQVKERAL
GQEVQKSLTPGQAMIKIVNEELVTIMGKANEKLNLATQPPAVILMAGLQGAGKTTTVAKL
ARWIKENLRKSVLVASADVYRPAAIQQLETLASEVKAEFFPSDASERPVDIARRAVEHGR
KRYMDVVIIDTAGRLHIDEDMMDEIKAVHAAIKPIETLFVVDSMTGQDAANTAKAFHDAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFMGVGEKTAALEVFHPDRVASRILGMGDV
LSLIEDVERTMDKAKAEKLAKKIHKGRRFDLNDYRDQLLQLKNMGGLAAMLDKLPGVGNV
PQHVKDKINDKEMYQQLAMIDSMTPAERSDPDILNPSRKRRITLGSGTEVQDLNRMLKQH
EQMQKMMKKLKGGNIMNLMKGMRGQLGRRLPF
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgttcgacaacctgaccgaccgcctctccgattccttgcgcaaactgcgcggccagggc
cgtttgaccgaggccaacgtccaggatgccctgcgcgaagtgcgccaggcattgctcgaa
gccgatgtcgcgttgccggtggtcaaggatttcatcgaacaggtgaaggagcgggcgctg
ggccaggaggtgcagaagagcctcacacccggccaggccatgatcaagatcgtcaacgag
gaactggtgacgatcatgggcaaggccaacgagaaactgaacctggccacccagccgccg
gcagtgatcctcatggcgggcctccagggtgcaggcaagaccaccaccgtcgccaagctg
gcgcgctggatcaaggagaatctgcgcaagtccgtgctggtggccagcgccgacgtctat
cgtccggccgccatccagcagctggagacattggccagcgaggtgaaggccgagttcttc
cccagcgatgcgagcgaacggcccgtcgatatcgctcgccgcgccgtcgagcacggacgg
aaacgctatatggacgtggtcatcatcgacaccgccgggcgtcttcacatcgacgaagac
atgatggacgagatcaaggccgtgcacgcggcgatcaagccgatcgaaaccctgttcgtg
gtggacagcatgaccggccaggatgccgccaacaccgcaaaggccttccacgacgcgctg
ccactgaccggcgtcatcctgaccaagaccgacggcgacgcccgcgggggcgcggcgctg
tcgatccgtcacatcaccggcaagccgatcaagttcatgggtgtgggcgagaagaccgcg
gctctggaggtgttccatccggaccgcgtggcttcgcgtatcctcggcatgggtgacgtg
ctctcgctgatcgaggacgtcgagcgcaccatggacaaggccaaggcggaaaaactcgcc
aagaagatccacaaaggcaggcgtttcgacctcaacgactaccgcgaccagttactgcag
ctcaagaacatgggcggcctcgccgccatgctggacaagctgccgggcgtggggaacgta
ccccagcacgtcaaggacaagatcaacgacaaggagatgtaccagcagctggcgatgatc
gattccatgacccccgccgaacggtccgaccccgacatcctcaacccttcccgcaagcgc
cgtatcaccctgggctcgggcaccgaggtgcaggacctgaaccgcatgctcaaacagcac
gagcagatgcagaaaatgatgaagaagctcaagggcggcaacatcatgaacctgatgaaa
ggcatgcgcggtcagctcggccgccggctgccgttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (42)   

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