KEGG   Mus caroli (Ryukyu mouse): 110294302
Entry
110294302         CDS       T05910                                 
Symbol
Brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
  KO
K23112  BRCA1-associated ATM activator 1
Organism
mcal  Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110294302 (Brat1)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     110294302 (Brat1)
SSDB
Motif
Pfam: HEAT HEAT_2 RTP1_C1 TetR_C_36
Other DBs
NCBI-GeneID: 110294302
NCBI-ProteinID: XP_021018094
Ensembl: MGP_CAROLIEiJ_G0027954
UniProt: A0A6P5PJQ4
Position
5:133421593..133436177
AA seq 867 aa
MVHFALSGLIPLAEGCGGGIRTPRLTRSRGERTSYPDLGGTACLIMDPECSRLLPALCAV
LADPRQLVADDTCLEKLLDWFKTVTEAESSLQVLQDHPCLMELLSHVLKPQDVSPRVLSF
ALRLVGVFAAQEDCFEYLQQGELLLGLFGESGAPSWAAWSIPSVRSGWIQGLCSLAHHPS
ALYFLADSGAVDTLFSLQGDPSLFVASAASQLLVHILALSMQGGAPGSPVPEAAAWPMCA
QKIVNHVDESLHAKATPQVTQALNVLTTTFGRCHNPWTGVLWERLSPPVARLFERDPIPA
VHALMDLLLRVARSPVLNFAACGLWEMLAQTLSRLSPTQAGPLALGTLKLQHCPQELRTQ
AFGVLLQPLACILKATTQAPGPPGLLDGTVGSLLTVDTLLSSKSACVGLLCQTLAHLEEL
QMLPQCPSPWPQVHLLQAAVTILHLCDGSADPSSSAGGRLCGTLGGCVRVQRAALDFLGT
LSQGTSPLELVLEVFAVLLKTLESPESSPMVLKKAFQATLRWLQNPHKTPSSSDLSSDAL
LFLGELFPILQKRLCSPCWEVRDSTLEFLTHLIRHWGGQADFREALRSSEVPTLALQLLQ
DPESYVRASAVGAAGQLSSQGLQAAPASPESPQAQQGLLMDLMHILSADSEGFPRRAVLR
VFTDWLRDGHTDVVRDTEWFVATVLQAVSRDLDWEVRVQGLELARVFLTQALGQPSLHCP
YTVGLPRASSPRPHLEFLQTLCRLPLFEFAFCALLDCDRPVAQKACDLLLFLRDKTVLCS
SPREAGDSPNSASVEAALQRWREGEQAQPLGDLDPEAMLAILRALDLEGLQGRLAKSSDH
VEKSPQSLLQDMLATVGVLEENEADCY
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggtgcattttgcactctcgggcctaattcccttagcggagggatgcgggggcgggatt
agaacccccaggctaactcgcagtcgcggagagcgcacctcttacccggatttgggagga
actgcctgcctgatcatggacccagaatgctccaggctcctcccggctctctgtgctgtt
ttggcagatcccagacagctggtggcagatgacacctgcttggagaaactgctggactgg
tttaaaacagtgacagaggcagagtccagcctccaggtactacaggaccatccctgctta
atggagctcctgtcccatgtgctgaagccacaggacgtgagccctagggtcctctccttt
gctctgcgccttgttggggtcttcgcagcccaggaagactgtttcgagtaccttcagcag
ggagagttgttgctggggctctttggggagtcaggtgcccccagctgggcagcctggagc
atcccaagtgtgcgcagcggctggatccagggcctgtgctccctggcacaccaccccagc
gccctgtacttcctggctgacagtggtgctgtggacacgctcttctccttgcagggagac
cccagcctgttcgtcgcctcagcagccagccagctcctagtacacatcctagctctgtcc
atgcaaggtggagccccagggtcccccgtccctgaagctgctgcttggcctatgtgtgcc
cagaagattgtgaaccatgtggatgagtccctgcatgccaaagccaccccccaggtcaca
caggccttgaatgtcctgactacgaccttcgggcgctgccataacccctggacaggggtc
ctctgggagcggctaagtccccctgttgcccgcctgtttgagagagaccccattccagcc
gtgcacgcgctcatggaccttcttcttcgtgtggccaggtcgcctgtgttgaattttgca
gcctgtggcctgtgggagatgctggcccagactctgagccgcctgagtcccacgcaagct
gggcctctagccctggggaccctgaaacttcagcactgtccccaggaactgaggacccag
gcctttggagtcctcctacagccactggcctgtatcctgaaagctaccactcaggcccct
ggacctccaggcttgctggacgggactgtgggtagcttgctgactgtggatacactcttg
tcttcaaagtcagcctgtgtgggactcctttgccagactctggctcacctggaggagctg
cagatgctgccccagtgcccctcaccctggccacaggtgcatctgctgcaagctgctgtg
actatattgcatctctgtgatggctcagcggaccccagctccagtgcgggaggccgtctc
tgtgggactctgggtggctgtgttcgtgtccagcgagcagcccttgacttcttggggacc
ctgtctcaggggacaagccccctggagttggttctggaggtatttgctgttctcctgaag
accctggagagcccggaatccagccccatggtcctaaagaaggccttccaggccacactc
agatggctccagaacccacacaagacccccagcagctctgatctcagctccgatgccctg
ctgtttctcggagagctattccccatactacagaagcgcctgtgcagcccatgttgggag
gtgagggactccaccttggagttcctgacgcatctgatccgacactggggagggcaggct
gacttcagagaggcactgcgttcctcagaagtacccacacttgccctccagcttctccaa
gacccagagagttacgtccgagcaagtgccgtgggtgccgctggacagctctccagccag
ggtctgcaggccgctcccgccagccccgagagcccgcaggcccagcagggactactcatg
gaccttatgcatatcctgtccgctgactcagagggcttccctcgaagggctgtgttacgg
gtcttcacggactggctgagggatggccacactgacgtggttcgagacacggagtggttc
gtggccactgttctccaggcagtgagccgggatctggactgggaggtccgagtgcagggt
ttggagctggcacgggtgttcctcacccaggcactgggccagcccagcctccactgtccc
tatacagtgggcctgcccagggcctcctctccccgcccacacctggaattcttgcagact
ctctgccgtctgcccctctttgagtttgccttttgtgccttgcttgactgtgaccgaccg
gtggcccaaaaggcctgtgacctgctcctcttcttgagggacaagacagttctctgcagt
agccctcgggaggcaggggacagccccaactcagcctcagtggaggctgccctgcagagg
tggcgggaaggagagcaggcccagcccctaggggacctggatcctgaggccatgctagcc
atcctcagggccttagacctggagggcctgcagggcaggctggccaagagcagcgaccat
gtggagaagagtccacagtccctgctgcaggacatgctggccacggtgggtgtgttggag
gagaacgaagctgactgctactaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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