KEGG   Macaca mulatta (rhesus monkey): 702082
Entry
702082            CDS       T01028                                 
Symbol
CPSF1
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 1
  KO
K14401  cleavage and polyadenylation specificity factor subunit 1
Organism
mcc  Macaca mulatta (rhesus monkey)
Pathway
mcc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    702082 (CPSF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcc03021]
    702082 (CPSF1)
   03019 Messenger RNA biogenesis [BR:mcc03019]
    702082 (CPSF1)
Transcription machinery [BR:mcc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     702082 (CPSF1)
Messenger RNA biogenesis [BR:mcc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     702082 (CPSF1)
SSDB
Motif
Pfam: CPSF_A MMS1_N UspB
Other DBs
NCBI-GeneID: 702082
NCBI-ProteinID: NP_001254722
Ensembl: ENSMMUG00000007380
UniProt: H9FTK0
Position
8:complement(144678941..144695895)
AA seq 1442 aa
MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK
AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL
HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG
QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSI
VAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVAL
NSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAF
HFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSK
KKRVDATASWSAGGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAM
GEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIA
PVRKEEEDNPKGEGTEQEARSPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFA
TQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSA
EGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDEL
GGRIGSEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEP
THWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQG
ELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINF
REKKPKPSKKKAEGGGTEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGAL
RLHPMAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCT
AHYVAYHVESKVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISP
VSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILI
MDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELT
GMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFM
VDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATE
GLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAF
RMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVTA
HF
NT seq 4329 nt   +upstreamnt  +downstreamnt
atgtacgccgtgtacaaacaggcgcatccgcccaccggcctggagttcgccatgtactgc
aacttcttcaacaacagcgagcgcaacctcgtggtggccgggacctcgcagctctacgtg
taccgcctcaaccgcgacgccgaggctctgaccaagaatgacaggagcacagaggggaag
gcccaccgggagaagctcgagctcgctgcctccttctctttctttggcaacgtcatgtcc
atggccagcgtgcagctggcaggagccaagcgggatgccctgctcctaagcttcaaggat
gccaagctgtctgtggtggaatacgacccgggcacccatgacctgaagaccctgtcgctg
cactactttgaggagcctgagcttcgggacgggtttgtgcagaacgtacacacgccgcga
gtgcgggtggaccctgatgggcgctgcgcagccatgcttgtctacggcacgcgactggtg
gtcctgcccttccgcagggagagcctggctgaggagcacgaggggctcgtgggtgagggg
cagaggtccagcttcctgcccagctacatcatcgatgtccgggccctagacgagaagctg
ctcaacatcatcgacctacagttcttgcatggctactatgagcccaccctgctcatcctg
ttcgagcccaaccagacctggcctgggcgcgtggctgtgcggcaggatacgtgctccatc
gtggccatctcactgaacatcacgcagaaggtgcaccccgtcatctggtccctcaccagc
ctgccctttgactgcacccaggctctggctgtgcccaagcccataggtggggtggtggtc
tttgccgtcaactctctgctgtacctgaaccagagcgttcccccatacggtgtggctctc
aacagcctcaccacaggcaccacagctttcccgctacgcacccaggagggtgtgcgaatc
accctggactgcgcgcaggccaccttcatctcctacgacaagatggtcatctccctcaag
ggcggcgagatctacgtgctgaccctcatcaccgacggcatgcgcagcgtccgagcattc
cactttgacaaggcggccgccagcgtcctcaccaccagcatggtcaccatggagcccggg
tacctgttcctgggttctcgcctgggcaactccctcctcctcaagtacacagagaagctg
caggagcccccggccagtgctgtccgtgaggctgctgacaaggaagagcctccctcaaag
aagaagcgagtggacgcgacggccagctggtcagctgggggtaaatcggtgccgcaggat
gaggtggacgagattgaagtgtacggcagcgaggcccagtcaggcacacagctggccacc
tactcctttgaggtgtgtgacagcatcctcaacatcggaccgtgcgccaacgctgccatg
ggcgagcctgccttcctctctgaagagtttcagaacagtcctgagccggacctggagatc
gtggtttgctctggccacgggaagaacggggctttgtcagtgctgcagaagagcatccgg
ccccaggtggtgacaacctttgagcttcccggctgctacgacatgtggacagtcattgcc
ccagtgcgtaaggaagaggaggacaatcccaagggggagggcacagagcaggaagccagg
agcccggaagcagacgatgacggccgtagacatggattcctgattctgagccgggaagac
tcaaccatgattctgcagacgggtcaggagatcatggagctggacaccagtggctttgcc
acgcagggccccacggtctttgctgggaacatcggggacaaccgctacattgtccaagtg
tcaccgctgggcatccgcctgctggaaggagtgaatcagctgcacttcatccctgtggac
ctgggcgcccccatcgtgcagtgcgctgtggccgacccctatgtggtcatcatgagtgcc
gagggccacgtcaccatgttcctgctgaagagtgactcctacggtggccgccaccaccgc
ctggcgctgcacaagcctcccttgcaccatcagtccaaggtcatcacgctgtgcctgtac
cgagacctcagcggcatgttcaccactgagagccgcctgggcggggcccgtgatgagctg
ggaggccgcatcggctcggaggccgagggcctgggctcggagactagccccaccgtggat
gacgaggaggagatgctgtatggggattcaggctccctcttcagccccagcaaggaggag
gcccgaagaagcagccaaccccctgctgaccgggaccctgcacccttccgggcagagccc
acccactggtgcctgctggtgcgggagaatggcaccatggagatctaccagctccccgac
tggcggctggtgttcctggtgaagaacttccctgtggggcagcgggtcctcgtggacagc
tcctttggacagcccactacacagggcgaggcccgcagggaggaggccacacgccagggg
gagctgcccctcgtcaaggaggtgctgctggtggcactgggcagccgccagagcaggccc
tacctgctggtgcatgtggaccaggagctgctcatctacgaggcctttccccacgactct
cagctcggccagggcaatctcaaagtccgctttaagaaggtccctcacaatatcaacttc
cgtgagaagaagccaaagccatccaagaagaaagcagaaggtggcggcacggaggagggg
gccggggcccggggccgcgtggcgcgtttccgctacttcgaggatatttatggctattca
ggggtgttcatctgcggcccctcccctcactggctgctggtgactggccgaggggctctg
cggctgcaccccatggccatcgatggccccgtcgactctttcgctccattccacaatgtc
aactgtccccgcggcttcctgtacttcaacagacagggcgagctgaggatcagtgtcctg
cctgcctatctgtcctatgacgccccatggcctgtcaggaagatcccgctgcgctgcacg
gcccactatgtggcttaccacgtggagtccaaggtgtatgctgtagccaccagcaccaac
acgccgtgtgcccgcatcccacgcatgactggcgaggagaaggagtttgagaccatcgag
agagatgagcggtacatccacccccagcaagaggccttctccatccagctcatctcccca
gtcagctgggaggctattcccaatgccaggatcgagctgcaggagtgggagcacgtgacc
tgcatgaagacagtgtcgctgcgcagcgaggagactgtgtcaggcctcaaaggctacgtg
gccgccgggacctgcctcatgcagggggaggaggtcacgtgccgaggacggatcttgatc
atggatgtgattgaggtggtacctgagcccggccagcccttgaccaagaacaagttcaaa
gtcctttacgagaaggagcagaaggggcctgtgactgccctttgccactgcaacggccac
ctggtgtccgccatcggccagaagattttcctgtggagcctgcgggccagtgagctgaca
ggcatggccttcatcgacacgcagctgtacatccaccagatgatcagcgtcaagaacttc
atcttggcagccgacgtcatgaagagcatttcgctgctgcgctaccaggaggagagcaag
acactgagcctggtgtcgcgggatgccaagcccctggaggtgtacagcgtggacttcatg
gtggacaacgcccagctgggttttctggtgtctgaccgtgaccgcaacctcatggtgtac
atgtacctgcccgaagccaaggagagttttgggggcatgcgcctactgcgcagggcggac
ttccacgtgggtgcccacgtgaacacgttctggaggaccccatgccggggggccaccgaa
gggctcagcaaaaagtcggtcgtgtgggagaataagcacatcacgtggtttgccaccctg
gacggtggtatcgggctgctgctgcccatgcaggagaagacctaccggcggctgctgatg
ctgcagaacgcgctgaccaccatgcttccgcaccacgccggcctcaacccccgtgccttc
cggatgctgcacgtggaccgccgcaccctccagaatgctgtgcgcaacgtgctggatggc
gagctgctcaaccgctacctgtacctgagcaccatggagcgcagcgagctagcgaagaag
atcggcaccacgcccgacataatcctggacgacttgctggagacggaccgcgtcaccgcc
cacttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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