KEGG T01205: MCRO

Mycoplasma crocodyli: MCRO_0451

Entry

MCRO_0451         CDS       T01205

Symbol

topA

Name

(GenBank) DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

mcd Mycoplasma crocodyli

Brite

KEGG Orthology (KO) [BR:mcd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcd03032]
    MCRO_0451 (topA)
   03400 DNA repair and recombination proteins [BR:mcd03400]
    MCRO_0451 (topA)
Enzymes [BR:mcd01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MCRO_0451 (topA)
DNA replication proteins [BR:mcd03032]
Prokaryotic type
  DNA Topoisomerases
   MCRO_0451 (topA)
DNA repair and recombination proteins [BR:mcd03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MCRO_0451 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim zf-C4_Topoisom

Other DBs

NCBI-ProteinID:

ADE19475

UniProt:

D5E5N5

Position

529359..531206

AA seq 615 aa
MSKFLVIVESPNKVATIKKYLGNDYDVEASVGHIAKMKTSGPYGLGIDFENWEPLYSLES
GKKELIKKLKDLAKNAEWVYISTDPDREGEAIGDHLVQYLKISDKYNRIKYNEITKDAIL
QAISKPANLDEDLVNAQKARRMLDRIIGFRLSQLMKQKLVNTPTNPSAGRVQSIALKLVI
DRENEIEAFIPEDYYKLEAHLGQELIANYINMENTSDKRDWIFPNQIDGYKTFFTNIKNN
TLTVSSVDVSEKRVGSVTPFKQAVLYRRSQYNSSITQSAAQKLYEGYGDGGLISYPRTDS
TRLSQTFIDNARKYVLDKWGQEYIASDVKGFSGDQDAHEAIRPTDLHLTPEIAKAKYSEM
TDYEYNVYKLIYINTLQAIMTRPLRVNKSYTLLIDKYTFKMNFSTVKFDGYYVITGQYDQ
DNNDPNYEINQKIKVNEYKFSDHQTKPRPRYTEGSLIEALDEIKVGRPSTFATTVKILKD
REYVINEASALKPTEFGKSVLEKLIFSFSNIINESYTALVEEQLDLIAENKLSKEPVMQD
FWQRFDETMNEAINTMERTVLLPISLDEKCPEDAADLLVKRNRKGQKFAGCANYPNCTYT
KSIEKPRGFFRKKAV

NT seq 1848 nt +upstreamnt +downstreamnt
atgagtaaatttttagtaatagttgaatccccaaacaaagtagcaacaataaaaaaatat
ttgggtaatgattatgatgtagaagcaagtgtaggtcacattgcaaaaatgaaaacatct
ggtccttatggattaggtattgattttgaaaattgagaaccattatattcgcttgaatca
ggaaaaaaagaattgataaaaaaattaaaagatttagcaaaaaatgctgaatgagtttat
atatcaactgaccccgaccgtgaaggagaagcaatcggtgatcacttagttcaatatcta
aaaataagtgataaatataatagaattaagtataatgaaattaccaaagatgctatacta
caagcaatttcaaaacccgctaacttagatgaagacttagttaatgcacaaaaggcaaga
agaatgcttgatagaataataggttttagattaagtcaattaatgaaacaaaaattagtt
aatacacctactaatcccagtgctggaagagtacaatcaatagctttaaaattagtaatt
gatcgcgaaaatgaaattgaagctttcataccagaagactactataaattagaagctcac
ttaggacaagaattaattgcaaattacattaatatggaaaatacttcagataaaagagat
tgaatttttcctaatcaaattgatgggtataaaacattttttacaaatataaaaaataat
acattaactgtttcaagtgttgatgtatcagaaaaaagagttggatctgttactcctttt
aaacaagctgtactttatagaagaagtcaatacaattcatcaataactcaatctgctgct
caaaaactttatgaaggttatggagatggcggattaatttcgtatccacgtaccgatagc
acaagactaagccaaacatttatagataacgcaagaaaatatgttcttgataaatgaggt
caagaatatatagctagtgatgtaaaaggattttcaggagatcaagatgcccatgaagca
ataagacctaccgatttacacttaacaccagaaatagcaaaagctaaatattctgaaatg
actgattacgaatataatgtttataaactaatttacattaatacactacaagcaataatg
actcgtccattgagagttaacaaaagttatactttattaattgataaatatacttttaaa
atgaatttttcaaccgttaaatttgatggatattatgtaattacaggtcaatatgatcaa
gataataatgatcctaattatgaaataaaccaaaaaattaaagttaatgaatataaattt
agtgatcaccaaacaaaaccaagaccaagatatacagaaggttctttaattgaagcactt
gatgaaattaaagttggaagaccatccacttttgccacaacagttaaaattttaaaggat
cgggaatatgtaattaatgaagcaagcgcacttaaaccaactgaatttggaaagtcagtt
ttagaaaaattaattttttcattctcaaatattattaacgaatcatatacagctcttgtt
gaagagcaattagatttaattgctgaaaataaattgtcaaaagaacctgtaatgcaagat
ttttgacaaagatttgacgaaactatgaatgaagcaattaacacaatggaaagaactgtt
ttacttcctatttctctagatgaaaaatgtcctgaggatgctgctgatctgcttgtaaaa
agaaatagaaaaggtcaaaaattcgcagggtgtgcaaattatccaaattgtacttataca
aaaagtattgaaaaaccaagaggattttttagaaaaaaggctgtataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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